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The map label for this gene is abgA [C]

Identifier: 38233251

GI number: 38233251

Start: 614468

End: 615658

Strand: Direct

Name: abgA [C]

Synonym: DIP0644

Alternate gene names: 38233251

Gene position: 614468-615658 (Clockwise)

Preceding gene: 38233250

Following gene: 38233252

Centisome position: 24.69

GC content: 56.17

Gene sequence:

>1191_bases
GTGGCGCAATCGGTTGCAGAGCATGTCACGCAATGGGCAGAACAACACCGTGACGAGGTGATCGAGTGGCGACGACACTT
TCACCGGCACCCAGAGCTCTCCCACATGGAATTTGCTACCACCGACTTTATCGAGGCCACCCTGCGTCGCTACGGGCTTA
ACCCACAACGATTCCCCAACACTGGGCTCATGGTGGACATCGGGCCCGACACCCCACAAAAAATCGCTTTCCGCGGCGAC
ATCGATGCTCTTCCCATCACAGAAAATGACGATCATGATGTGATCTCAGAAAACTACGGCGTCATGCACGCCTGCGGACA
CGACGTCCACATCACCGTCGCACTTGCAACCGCCTGTGCACTTGCTTCTGCAGACCTCACCATCGGCGTGCGCGTGATCT
TCCAACCTGCCGAAGAAGTCATGGAAGGCGGTGCCCCAGAAGTCATCGAATTCGGGGCGCTGAAAGGTGTGTCCAACATC
TTCGCTATTCATGCCGAACCCAAACTCGCAGTCGGCAAAGTAGGTGTTCGTGCCGGCGCAATTACCAGCGCCTCCGACGT
TATCGAAATCAAAGTATTTGGATCCGGTGGCCATACCTCTCGTCCGCACCTTACCGCCGACGTTGTCTATGCGCTTTCTA
AACTGGTCGTTGACTTGCCAGGACTGTTATCGCGCCGGGTAGATCCACGCACAGGCACCGTCTTAGTCTTTGGGATGATT
AACGCAGGCTATGCGCCTAACGCCATCACGGAAGAAGGATCTGTGAAAGGGACTATCCGGACCGCGGACATTGGGGTGTG
GCGAATGATGGAAGGACTCCTTGCAGAGTTGGTACCTCAGGTGCTTGCTCCTACAGGATGTACTTACGAGCTGATCCACC
ATAAAGGGGTACCGCCGGTGCTCAATGACGATGTCGCGACCGCCGTCATTGCCGACGCGGCACGCACGATTAACCCCAGC
ACCGTAGTGGAAGCACCGCAGTCTTCAGGCGGTGAAGACTTCTCGTGGTACCTCGAGCATGTTCCAGGTTCAATGGCCCG
TCTAGGCTGCTGGAATGGGGAAGGAACCCCCGGTGACCTGCACCAAGCCGATATGTATGCAGACGAGCGTTGCCTTGAAG
TAGGAGTGCGTCTCTTCGGTGCGGTAGCCGATCGCTACAACTCCCACAACGCGATGTTTATTGAGGATTAA

Upstream 100 bases:

>100_bases
CTAGATACTTTCCTATGAACGAGGGGCTATAACTTTCCTTTCTTCTTGCTGTGGTTAGGATGAAAGATTGCATGCAGAAA
AGGGAAGGTAGGGAAGTATC

Downstream 100 bases:

>100_bases
TCGCACGCGATTCCAGTGGGGGTAAAGTGCGCGATTCGCGCTGTGGGATGTCTCCGATACACTTGGGCGTTGGACTCATC
TAACCGGCACACCCATACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MAQSVAEHVTQWAEQHRDEVIEWRRHFHRHPELSHMEFATTDFIEATLRRYGLNPQRFPNTGLMVDIGPDTPQKIAFRGD
IDALPITENDDHDVISENYGVMHACGHDVHITVALATACALASADLTIGVRVIFQPAEEVMEGGAPEVIEFGALKGVSNI
FAIHAEPKLAVGKVGVRAGAITSASDVIEIKVFGSGGHTSRPHLTADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGMI
NAGYAPNAITEEGSVKGTIRTADIGVWRMMEGLLAELVPQVLAPTGCTYELIHHKGVPPVLNDDVATAVIADAARTINPS
TVVEAPQSSGGEDFSWYLEHVPGSMARLGCWNGEGTPGDLHQADMYADERCLEVGVRLFGAVADRYNSHNAMFIED

Sequences:

>Translated_396_residues
MAQSVAEHVTQWAEQHRDEVIEWRRHFHRHPELSHMEFATTDFIEATLRRYGLNPQRFPNTGLMVDIGPDTPQKIAFRGD
IDALPITENDDHDVISENYGVMHACGHDVHITVALATACALASADLTIGVRVIFQPAEEVMEGGAPEVIEFGALKGVSNI
FAIHAEPKLAVGKVGVRAGAITSASDVIEIKVFGSGGHTSRPHLTADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGMI
NAGYAPNAITEEGSVKGTIRTADIGVWRMMEGLLAELVPQVLAPTGCTYELIHHKGVPPVLNDDVATAVIADAARTINPS
TVVEAPQSSGGEDFSWYLEHVPGSMARLGCWNGEGTPGDLHQADMYADERCLEVGVRLFGAVADRYNSHNAMFIED
>Mature_395_residues
AQSVAEHVTQWAEQHRDEVIEWRRHFHRHPELSHMEFATTDFIEATLRRYGLNPQRFPNTGLMVDIGPDTPQKIAFRGDI
DALPITENDDHDVISENYGVMHACGHDVHITVALATACALASADLTIGVRVIFQPAEEVMEGGAPEVIEFGALKGVSNIF
AIHAEPKLAVGKVGVRAGAITSASDVIEIKVFGSGGHTSRPHLTADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGMIN
AGYAPNAITEEGSVKGTIRTADIGVWRMMEGLLAELVPQVLAPTGCTYELIHHKGVPPVLNDDVATAVIADAARTINPST
VVEAPQSSGGEDFSWYLEHVPGSMARLGCWNGEGTPGDLHQADMYADERCLEVGVRLFGAVADRYNSHNAMFIED

Specific function: ATP-dependent carboxylate-amine ligase [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the peptidase M20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011793
- InterPro:   IPR006336
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF04107 GCS2; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42810; Mature: 42679

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSVAEHVTQWAEQHRDEVIEWRRHFHRHPELSHMEFATTDFIEATLRRYGLNPQRFPN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
TGLMVDIGPDTPQKIAFRGDIDALPITENDDHDVISENYGVMHACGHDVHITVALATACA
CCEEEEECCCCCHHEEEECCCCCCCCCCCCCCCHHHCCCCEEEECCCCEEEEHHHHHHHH
LASADLTIGVRVIFQPAEEVMEGGAPEVIEFGALKGVSNIFAIHAEPKLAVGKVGVRAGA
HHCCCCEEEEEEEEECHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCC
ITSASDVIEIKVFGSGGHTSRPHLTADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGMI
CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEE
NAGYAPNAITEEGSVKGTIRTADIGVWRMMEGLLAELVPQVLAPTGCTYELIHHKGVPPV
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCC
LNDDVATAVIADAARTINPSTVVEAPQSSGGEDFSWYLEHVPGSMARLGCWNGEGTPGDL
CCCHHHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHCCCCHHEEECCCCCCCCCCC
HQADMYADERCLEVGVRLFGAVADRYNSHNAMFIED
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
AQSVAEHVTQWAEQHRDEVIEWRRHFHRHPELSHMEFATTDFIEATLRRYGLNPQRFPN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
TGLMVDIGPDTPQKIAFRGDIDALPITENDDHDVISENYGVMHACGHDVHITVALATACA
CCEEEEECCCCCHHEEEECCCCCCCCCCCCCCCHHHCCCCEEEECCCCEEEEHHHHHHHH
LASADLTIGVRVIFQPAEEVMEGGAPEVIEFGALKGVSNIFAIHAEPKLAVGKVGVRAGA
HHCCCCEEEEEEEEECHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCC
ITSASDVIEIKVFGSGGHTSRPHLTADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGMI
CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEE
NAGYAPNAITEEGSVKGTIRTADIGVWRMMEGLLAELVPQVLAPTGCTYELIHHKGVPPV
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCC
LNDDVATAVIADAARTINPSTVVEAPQSSGGEDFSWYLEHVPGSMARLGCWNGEGTPGDL
CCCHHHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHCCCCHHEEECCCCCCCCCCC
HQADMYADERCLEVGVRLFGAVADRYNSHNAMFIED
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA