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The map label for this gene is nreC [H]

Identifier: 38233207

GI number: 38233207

Start: 567764

End: 568459

Strand: Direct

Name: nreC [H]

Synonym: DIP0600

Alternate gene names: 38233207

Gene position: 567764-568459 (Clockwise)

Preceding gene: 38233206

Following gene: 38233208

Centisome position: 22.81

GC content: 54.89

Gene sequence:

>696_bases
ATGAAAGTATTCCTCGTCGATGACCACAGTGTTTTCCGGGCTGGTGTGAAAGCAGAAATTAGCGATGCCGTCGATATTGT
TGGCGAGGCGGGAACCGTCGCCGACGCCATTGCCGGCATCAACGCCACAGACCCAGACGTGGTGCTTCTCGACGTCCACA
TGCCCGATGGTGGCGGCGTAGCTGTTGTACGCAGCATCCTTTCGCAGCAAGGTATCGGAAGGAATCGTCGATTCCTTGCA
CTAAGTGTTTCGGATGCCGCCGAGGACGTAATTTCGGTTATCCGTGCTGGCGCTCGGGGCTACGTGACCAAGACGATCTC
GGGTGCAGAATTAGTCGATGCTATTCGCCGAGTCCATGATGGCGATGCAGTGTTTTCGCCACGACTCGCTGGATTTGTTT
TGGATGCCTTCGCGCGCCCCGATCCGGTTGGTGCTGGTGTGGTCAATGCTCCAGAATCTGATCGCGCTGTTGAGGAAGGT
AAACCGGTTGCGGATCCTATTGTGGATGCGTTGACGCGCCGGGAGCTGGAGGTTTTGAAGTTGTTGGCTCGTGGTTATAC
CTACAAAGAGATTGCGGCGGAGTTGTTCATTTCGGTGAAGACCGTCGAAACGCATGCGTCGAATATTTTGCGCAAGACAC
AGCAGTCGAATCGTCATGCGCTTTCTCGGTGGGCACAGTCGCACGATTTGGATTAG

Upstream 100 bases:

>100_bases
TTATCGCTCGAGTGCAACGCTGTGGCGGTGAAGCACAAATCACCTCCAATAACGGCACGGAAGTCGTGATTCGAATGCCT
TTTGACGGACAATAGAAGGC

Downstream 100 bases:

>100_bases
CGCGTGGGGGACGTGCGGCGCGCAGTTGGGGCTGGTTTTCGTTTGTTTCGCGTTCTAAGCAGGCGGGGCACATGCGTAAG
GCTTGATGGCAGAAGCATGC

Product: putative two component system response regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKVFLVDDHSVFRAGVKAEISDAVDIVGEAGTVADAIAGINATDPDVVLLDVHMPDGGGVAVVRSILSQQGIGRNRRFLA
LSVSDAAEDVISVIRAGARGYVTKTISGAELVDAIRRVHDGDAVFSPRLAGFVLDAFARPDPVGAGVVNAPESDRAVEEG
KPVADPIVDALTRRELEVLKLLARGYTYKEIAAELFISVKTVETHASNILRKTQQSNRHALSRWAQSHDLD

Sequences:

>Translated_231_residues
MKVFLVDDHSVFRAGVKAEISDAVDIVGEAGTVADAIAGINATDPDVVLLDVHMPDGGGVAVVRSILSQQGIGRNRRFLA
LSVSDAAEDVISVIRAGARGYVTKTISGAELVDAIRRVHDGDAVFSPRLAGFVLDAFARPDPVGAGVVNAPESDRAVEEG
KPVADPIVDALTRRELEVLKLLARGYTYKEIAAELFISVKTVETHASNILRKTQQSNRHALSRWAQSHDLD
>Mature_231_residues
MKVFLVDDHSVFRAGVKAEISDAVDIVGEAGTVADAIAGINATDPDVVLLDVHMPDGGGVAVVRSILSQQGIGRNRRFLA
LSVSDAAEDVISVIRAGARGYVTKTISGAELVDAIRRVHDGDAVFSPRLAGFVLDAFARPDPVGAGVVNAPESDRAVEEG
KPVADPIVDALTRRELEVLKLLARGYTYKEIAAELFISVKTVETHASNILRKTQQSNRHALSRWAQSHDLD

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=222, Percent_Identity=35.5855855855856, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1790102, Length=225, Percent_Identity=32, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1788222, Length=232, Percent_Identity=28.8793103448276, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787473, Length=205, Percent_Identity=34.6341463414634, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1788712, Length=238, Percent_Identity=23.9495798319328, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24642; Mature: 24642

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFLVDDHSVFRAGVKAEISDAVDIVGEAGTVADAIAGINATDPDVVLLDVHMPDGGGV
CEEEEECCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCH
AVVRSILSQQGIGRNRRFLALSVSDAAEDVISVIRAGARGYVTKTISGAELVDAIRRVHD
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCC
GDAVFSPRLAGFVLDAFARPDPVGAGVVNAPESDRAVEEGKPVADPIVDALTRRELEVLK
CCCHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
LLARGYTYKEIAAELFISVKTVETHASNILRKTQQSNRHALSRWAQSHDLD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVFLVDDHSVFRAGVKAEISDAVDIVGEAGTVADAIAGINATDPDVVLLDVHMPDGGGV
CEEEEECCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCH
AVVRSILSQQGIGRNRRFLALSVSDAAEDVISVIRAGARGYVTKTISGAELVDAIRRVHD
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCC
GDAVFSPRLAGFVLDAFARPDPVGAGVVNAPESDRAVEEGKPVADPIVDALTRRELEVLK
CCCHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
LLARGYTYKEIAAELFISVKTVETHASNILRKTQQSNRHALSRWAQSHDLD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]