| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233200
Identifier: 38233200
GI number: 38233200
Start: 561256
End: 561825
Strand: Direct
Name: 38233200
Synonym: DIP0593
Alternate gene names: NA
Gene position: 561256-561825 (Clockwise)
Preceding gene: 38233199
Following gene: 38233201
Centisome position: 22.55
GC content: 51.23
Gene sequence:
>570_bases ATGAGTTTCGGGATGCGCACAGCATCTATTGCTTTCAGTCTGGCGCTAGCTCTTCCAATGTCTATGATGTCAGCCCCGAA AGCACAGGCATTTCCAGATTTCCCAATCTCACTAGAGCAGGAAACAAGCTACGCAGTCACTAACTCTAATGACTGTTCCG AATTACACAACGATGAGCCAGTAGCTGTGCCATATGCGGCAGTGGCTGCTGTAGAAGAGCTCATTGACAACGGCATCATT GATCCTAGCGTTGTTTTCGCTCTGAACAACACCGACCCGAATGTTACTGTCGTTGGACCGCAGCCTCGAGCATTGCCCGC AGTTGCAGCACTTGCTCTTGCTGGAGTCGCGTGGTGTGCTAAGGGTGCGTTGTCAAGTCTCGTTCCTTCAGCGTTGCAAG CAATGGTGCCTCAAGCTAATTCGAACGTTCCGCTATCTGATCGGGTTTTGAATGCTCTCTTCGGCTGCGCTGAAGGCCCT GTATTGGGTGCGGTTAGCAGTCAGGTGATGCGCCTAAAGTTCGCAGGTGCCGTCCTTGCTGCTGTTATTAAGTTGAGGAA TTTTGGGTAG
Upstream 100 bases:
>100_bases TATGCCGCAAAGCACCCTTCGTGGGTGTTGAACTCCAGAAACCAAGTGCCACACTGACAATTATGGGCAAAGTTCATAGG CAACGACAGGAGTAATTGCT
Downstream 100 bases:
>100_bases TATTTGGTTTCCGCTCTCCGTGATGATTTGCGCGGCTATCTTTTGTGCTACTGCCATACCAGCTGCTTATAGTTCCAGAC CAAATCACCCTTTGATCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSFGMRTASIAFSLALALPMSMMSAPKAQAFPDFPISLEQETSYAVTNSNDCSELHNDEPVAVPYAAVAAVEELIDNGII DPSVVFALNNTDPNVTVVGPQPRALPAVAALALAGVAWCAKGALSSLVPSALQAMVPQANSNVPLSDRVLNALFGCAEGP VLGAVSSQVMRLKFAGAVLAAVIKLRNFG
Sequences:
>Translated_189_residues MSFGMRTASIAFSLALALPMSMMSAPKAQAFPDFPISLEQETSYAVTNSNDCSELHNDEPVAVPYAAVAAVEELIDNGII DPSVVFALNNTDPNVTVVGPQPRALPAVAALALAGVAWCAKGALSSLVPSALQAMVPQANSNVPLSDRVLNALFGCAEGP VLGAVSSQVMRLKFAGAVLAAVIKLRNFG >Mature_188_residues SFGMRTASIAFSLALALPMSMMSAPKAQAFPDFPISLEQETSYAVTNSNDCSELHNDEPVAVPYAAVAAVEELIDNGIID PSVVFALNNTDPNVTVVGPQPRALPAVAALALAGVAWCAKGALSSLVPSALQAMVPQANSNVPLSDRVLNALFGCAEGPV LGAVSSQVMRLKFAGAVLAAVIKLRNFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19483; Mature: 19351
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFGMRTASIAFSLALALPMSMMSAPKAQAFPDFPISLEQETSYAVTNSNDCSELHNDEP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCCCHHHHCCCCC VAVPYAAVAAVEELIDNGIIDPSVVFALNNTDPNVTVVGPQPRALPAVAALALAGVAWCA CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH KGALSSLVPSALQAMVPQANSNVPLSDRVLNALFGCAEGPVLGAVSSQVMRLKFAGAVLA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AVIKLRNFG HHHHHHCCC >Mature Secondary Structure SFGMRTASIAFSLALALPMSMMSAPKAQAFPDFPISLEQETSYAVTNSNDCSELHNDEP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCCCHHHHCCCCC VAVPYAAVAAVEELIDNGIIDPSVVFALNNTDPNVTVVGPQPRALPAVAALALAGVAWCA CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH KGALSSLVPSALQAMVPQANSNVPLSDRVLNALFGCAEGPVLGAVSSQVMRLKFAGAVLA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AVIKLRNFG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA