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The map label for this gene is rhtA [H]

Identifier: 38233198

GI number: 38233198

Start: 559337

End: 560233

Strand: Reverse

Name: rhtA [H]

Synonym: DIP0589

Alternate gene names: 38233198

Gene position: 560233-559337 (Counterclockwise)

Preceding gene: 38233203

Following gene: 38233188

Centisome position: 22.51

GC content: 59.87

Gene sequence:

>897_bases
ATGCTCCAACGCACAGCCACCACCACCGGCGTCTTATTCATCATCGCCTCCTGCTGCTCACTCCAAATGGGAGCAGCATT
CGCCATCCAACTCTTCCCCATCGCCGGCCCATGGGCCACCACCTTCGCACGACTGTTTATCTCCGGGGCCATACTCCTCG
CCATCACGCGGCCGTCGATACGCGACTTCGACCGCAGCCAATGGTCAGCCATCATCGTCTTCGGACTCACCATCGGCGCA
ATGAACACCACCTTCTACGCCGCACTCTCCCGAATCCCACTGGGCACCGCCGTCACCATCGAATTCATCGGCCCACTTAC
TCTCTCAGCAGTGCTTTCGAAAAGCGCACGCGACCTCCTATGGGTCCTCATCGCCATCGCCGGCATCAGCCTCTTCGGCT
GGGAAAGCCTCTTCGGCACCGGAAACCTAGACCCCATCGGAGTCGCCTTCGTCCTCATCGCCGGATTCTTCTGGGCCATG
TACATCCTCGCCAGCGCCAAAGTCGGCAGACTCATCCCCGGCAGCGGCGGACTCGCTCTCGGCATGCTCATCGGCAGCCT
CATTCCACTCCCCCTCGGCGCCGTCAACCTTCCCCTCTTTTTCACAAGCTCCCACCTCATCGCGCTTGCCATCGGCACCG
CAATCCTCGCCTCCCTAATTCCCTACTCCTTCGAAATGGCCGCGTTACGACGTCTCCCCTCCGCCATATTCGGAATCCTC
TGCTCCCTCGAACCCGTCTTCGCAGCATTCTTCGGCTGGCTACTACTCCACCAACCCATCAGTACCATCAGCGTGATCGC
CATGGCGCTCGTCATCACCGCCAGCGCGGGAACCACAATTAATGCGAACCGGAAAAACACGCCAAAAGTTTCTGTCACGC
TCAACGAGACGACCTAG

Upstream 100 bases:

>100_bases
TCTCCACAATTCCCTTCCTTTTTGTGAGTGCCGACACGTCCTCCTTCCTTACCATCACTAGTTAGTGTTTTAGATCACCC
ATCAAGTTGTAGTTCCCCTC

Downstream 100 bases:

>100_bases
CATAAACTAAGGCGCATGTTTCACGACGTGACACTAAAACCGGAAAGAATCGACGATTCTTTCCGCGTGGACTATTTCAG
TGTGATTCGTGAGGAATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLQRTATTTGVLFIIASCCSLQMGAAFAIQLFPIAGPWATTFARLFISGAILLAITRPSIRDFDRSQWSAIIVFGLTIGA
MNTTFYAALSRIPLGTAVTIEFIGPLTLSAVLSKSARDLLWVLIAIAGISLFGWESLFGTGNLDPIGVAFVLIAGFFWAM
YILASAKVGRLIPGSGGLALGMLIGSLIPLPLGAVNLPLFFTSSHLIALAIGTAILASLIPYSFEMAALRRLPSAIFGIL
CSLEPVFAAFFGWLLLHQPISTISVIAMALVITASAGTTINANRKNTPKVSVTLNETT

Sequences:

>Translated_298_residues
MLQRTATTTGVLFIIASCCSLQMGAAFAIQLFPIAGPWATTFARLFISGAILLAITRPSIRDFDRSQWSAIIVFGLTIGA
MNTTFYAALSRIPLGTAVTIEFIGPLTLSAVLSKSARDLLWVLIAIAGISLFGWESLFGTGNLDPIGVAFVLIAGFFWAM
YILASAKVGRLIPGSGGLALGMLIGSLIPLPLGAVNLPLFFTSSHLIALAIGTAILASLIPYSFEMAALRRLPSAIFGIL
CSLEPVFAAFFGWLLLHQPISTISVIAMALVITASAGTTINANRKNTPKVSVTLNETT
>Mature_298_residues
MLQRTATTTGVLFIIASCCSLQMGAAFAIQLFPIAGPWATTFARLFISGAILLAITRPSIRDFDRSQWSAIIVFGLTIGA
MNTTFYAALSRIPLGTAVTIEFIGPLTLSAVLSKSARDLLWVLIAIAGISLFGWESLFGTGNLDPIGVAFVLIAGFFWAM
YILASAKVGRLIPGSGGLALGMLIGSLIPLPLGAVNLPLFFTSSHLIALAIGTAILASLIPYSFEMAALRRLPSAIFGIL
CSLEPVFAAFFGWLLLHQPISTISVIAMALVITASAGTTINANRKNTPKVSVTLNETT

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=282, Percent_Identity=34.3971631205674, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31425; Mature: 31425

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRTATTTGVLFIIASCCSLQMGAAFAIQLFPIAGPWATTFARLFISGAILLAITRPSI
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCEEEEEEECCCH
RDFDRSQWSAIIVFGLTIGAMNTTFYAALSRIPLGTAVTIEFIGPLTLSAVLSKSARDLL
HHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
WVLIAIAGISLFGWESLFGTGNLDPIGVAFVLIAGFFWAMYILASAKVGRLIPGSGGLAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
GMLIGSLIPLPLGAVNLPLFFTSSHLIALAIGTAILASLIPYSFEMAALRRLPSAIFGIL
HHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
CSLEPVFAAFFGWLLLHQPISTISVIAMALVITASAGTTINANRKNTPKVSVTLNETT
HCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCC
>Mature Secondary Structure
MLQRTATTTGVLFIIASCCSLQMGAAFAIQLFPIAGPWATTFARLFISGAILLAITRPSI
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCEEEEEEECCCH
RDFDRSQWSAIIVFGLTIGAMNTTFYAALSRIPLGTAVTIEFIGPLTLSAVLSKSARDLL
HHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
WVLIAIAGISLFGWESLFGTGNLDPIGVAFVLIAGFFWAMYILASAKVGRLIPGSGGLAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
GMLIGSLIPLPLGAVNLPLFFTSSHLIALAIGTAILASLIPYSFEMAALRRLPSAIFGIL
HHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
CSLEPVFAAFFGWLLLHQPISTISVIAMALVITASAGTTINANRKNTPKVSVTLNETT
HCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]