| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233131
Identifier: 38233131
GI number: 38233131
Start: 490628
End: 492664
Strand: Reverse
Name: 38233131
Synonym: DIP0522
Alternate gene names: NA
Gene position: 492664-490628 (Counterclockwise)
Preceding gene: 38233132
Following gene: 38233124
Centisome position: 19.8
GC content: 49.29
Gene sequence:
>2037_bases ATGGCTTCCGTGCAACGTTCCCGTTTCACGCACCTTCTCACCACAGCAACAATCGCTGCCCTCCTCCCTCTCGCACCTGT AACGGCCGCAGCAGAGGACGTCGAAAAGCCTGTTACAATCGCCACTTCAGGCAAGCTGAACTGGGGTATCCGCGAAAGCT TTAACAACTACACCAACGGTGCCAGCAAAGTTGAAGACGGCGCAACACTCATCTCCACCAACAACTTCGAGTTCAAACTC GAAAAAGCTACTTATGACGCTGCAAAAGAACGCACCGAAGCGCAATTCCGTGGAAAAATCGTCTACTTGAAGTACTGCGA CGATATGAAAACTTTCACCAACTGCCAACTCGATCTGACCATCAAAGATCCCAAGATCGTGATCAGCAACGAGGAAAACT ACGTTGAAGCCGTAGTGGACTCCAAGCAGTACCCATCCGGCGAGTGGTACAAATCCAATGGGCCAGTAAAGATCGCTAAC CTCTACCCTGGCAGCGCCACCGTAGACAGCAAGGACAACTCCACCGAGTGGACCAACGTGGTGTCCGCGCTAGCTAACCC AGGTGGTGTCAAGATGTTCTCCGAGTTCTACGGTGAGAATGAAGGCCTTGCACCATTGTCCTTCTCCTATGACGGCGCGG GTGCCAAGCCTTCCCTCCTCAAGGGCGGCTACATCCAAGCCGGCAATGAGTGGAAATCCGGACAAGAATACTCAGATGGC CACCACAAACTAGTTGATCTAGGCGATGCCATCTTGGTAGCTGCCGGTAAGAAGGGCTTCTATCTTCTGGATAATGACCT CAAAGAGCTTCAAAAGCTAGAAGTACCGGGCCTTGGCAAAGTCAAAGTCGGCGCATACGATTCCGCAGCGCACATGTACT ACTACGTGGATAGTAAAAATAAAAAAGATCTGATGGGCATTGAAGTGTCTAGCACTTCGCTGGGGCAGCCAAAGAAGATC GCCACGGCTACCGGCAATATCGAAAATATCGGATACCACCCAAAAACAAATCAGGTGGTCGTGATTTCAGAAACCACTTC CGACAAATACATTCCTCTTAATGAACGTGAAACAAAACTGGGGATTCTGTCAGGGAATACCTTTGATTACAAAGATCTTC CAAAACCAAAAGATCTTTTTGCAAAGGACCTTAACGGACTCGATGTCATAGGCACCAACACGCCTTATTCCATGATGCTC GATCACAATGATGTTCCTGAGTTCCTACCGATGAACGACGGTACTTTTATCTTGAGCACAAGTTCCGATATGCGTGCGGA TACTCCCGATTCTCAGCAGCTGTTTAAAGGAATACTCATTTCGATCAAACCCGATGCTGCAGGTACAGATGCAGACCCGT ATGCAAAGCCTATGGAAGGTTCCCGAACCAATAATCCAGAGCTCAACGATCTTCTGCATATCCATTCCAATGGTTCTTTG ATCGTCCGTTTTGATAAAAATGAGCACAAGGATTACTCCTTCGGTCAGATCCTCAAGTACACCGATCGTGACGTAGAGAA GGTTTCTGAGCGTCTTGGAGTGGATCAGACGGGATTCACCGGCTGGGCAAACGTGGGCTTTGACAACAAGGGCAATGCAA TTATCGAGAGTGGCTCCGAAGGCAAGCTCACTTGGTATGACTCCAATAAGAAGGAGCTGCTCAAGGACACTGAGGTTCGG TTGTCTCGTGGTCGCCAGACTTTTGAGTTCCCCCACGGTACTTTCATTGTCCGTGAAGATGGCACCATCATTGTGCCGAA CTACAACAAGAGTGATGACACGAACGAGGTCTACTCCCTAGTCGAACTTGTCGATTCCAGCAAGCCACCAGCGGTGAAGG AATCCAGCGATGAGTCTGCTTTGGAAAAGCTCAAGAATAAACATGACGGTTCCGAATCAGGATCATCCACAGGTGGCTTT TCGTGGTCGAGCGTTTTGGGCAAGCTGTCCACAGTGCTCTCGATCATGATCGCAGCATTCGGCATTGGCAGCATGCTGGC TAAGATCTTCAACATTCGAATCCCAGGTATTCGTTAA
Upstream 100 bases:
>100_bases TAAACAGCGCAGCAGCAAGGGTGACGCCCCTCCTTCTCCCCTTCCATCAATCGAAACTACATACCGTCCATCGCCTCTAG ATTTAATTAAGGAAAATTTT
Downstream 100 bases:
>100_bases TCAATAACGTAAAAAGGAGCGCTCCCCTCACCAAAGAGGAGCGCTCCTTATTCTATGCGATTAGAAGCGTTGCCAGTCTG GCTTATTCTCTAGCGCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cell-Surface Hemin Receptor; Serine Protease Subtilase Family; Alpha-Mannosidase
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MASVQRSRFTHLLTTATIAALLPLAPVTAAAEDVEKPVTIATSGKLNWGIRESFNNYTNGASKVEDGATLISTNNFEFKL EKATYDAAKERTEAQFRGKIVYLKYCDDMKTFTNCQLDLTIKDPKIVISNEENYVEAVVDSKQYPSGEWYKSNGPVKIAN LYPGSATVDSKDNSTEWTNVVSALANPGGVKMFSEFYGENEGLAPLSFSYDGAGAKPSLLKGGYIQAGNEWKSGQEYSDG HHKLVDLGDAILVAAGKKGFYLLDNDLKELQKLEVPGLGKVKVGAYDSAAHMYYYVDSKNKKDLMGIEVSSTSLGQPKKI ATATGNIENIGYHPKTNQVVVISETTSDKYIPLNERETKLGILSGNTFDYKDLPKPKDLFAKDLNGLDVIGTNTPYSMML DHNDVPEFLPMNDGTFILSTSSDMRADTPDSQQLFKGILISIKPDAAGTDADPYAKPMEGSRTNNPELNDLLHIHSNGSL IVRFDKNEHKDYSFGQILKYTDRDVEKVSERLGVDQTGFTGWANVGFDNKGNAIIESGSEGKLTWYDSNKKELLKDTEVR LSRGRQTFEFPHGTFIVREDGTIIVPNYNKSDDTNEVYSLVELVDSSKPPAVKESSDESALEKLKNKHDGSESGSSTGGF SWSSVLGKLSTVLSIMIAAFGIGSMLAKIFNIRIPGIR
Sequences:
>Translated_678_residues MASVQRSRFTHLLTTATIAALLPLAPVTAAAEDVEKPVTIATSGKLNWGIRESFNNYTNGASKVEDGATLISTNNFEFKL EKATYDAAKERTEAQFRGKIVYLKYCDDMKTFTNCQLDLTIKDPKIVISNEENYVEAVVDSKQYPSGEWYKSNGPVKIAN LYPGSATVDSKDNSTEWTNVVSALANPGGVKMFSEFYGENEGLAPLSFSYDGAGAKPSLLKGGYIQAGNEWKSGQEYSDG HHKLVDLGDAILVAAGKKGFYLLDNDLKELQKLEVPGLGKVKVGAYDSAAHMYYYVDSKNKKDLMGIEVSSTSLGQPKKI ATATGNIENIGYHPKTNQVVVISETTSDKYIPLNERETKLGILSGNTFDYKDLPKPKDLFAKDLNGLDVIGTNTPYSMML DHNDVPEFLPMNDGTFILSTSSDMRADTPDSQQLFKGILISIKPDAAGTDADPYAKPMEGSRTNNPELNDLLHIHSNGSL IVRFDKNEHKDYSFGQILKYTDRDVEKVSERLGVDQTGFTGWANVGFDNKGNAIIESGSEGKLTWYDSNKKELLKDTEVR LSRGRQTFEFPHGTFIVREDGTIIVPNYNKSDDTNEVYSLVELVDSSKPPAVKESSDESALEKLKNKHDGSESGSSTGGF SWSSVLGKLSTVLSIMIAAFGIGSMLAKIFNIRIPGIR >Mature_677_residues ASVQRSRFTHLLTTATIAALLPLAPVTAAAEDVEKPVTIATSGKLNWGIRESFNNYTNGASKVEDGATLISTNNFEFKLE KATYDAAKERTEAQFRGKIVYLKYCDDMKTFTNCQLDLTIKDPKIVISNEENYVEAVVDSKQYPSGEWYKSNGPVKIANL YPGSATVDSKDNSTEWTNVVSALANPGGVKMFSEFYGENEGLAPLSFSYDGAGAKPSLLKGGYIQAGNEWKSGQEYSDGH HKLVDLGDAILVAAGKKGFYLLDNDLKELQKLEVPGLGKVKVGAYDSAAHMYYYVDSKNKKDLMGIEVSSTSLGQPKKIA TATGNIENIGYHPKTNQVVVISETTSDKYIPLNERETKLGILSGNTFDYKDLPKPKDLFAKDLNGLDVIGTNTPYSMMLD HNDVPEFLPMNDGTFILSTSSDMRADTPDSQQLFKGILISIKPDAAGTDADPYAKPMEGSRTNNPELNDLLHIHSNGSLI VRFDKNEHKDYSFGQILKYTDRDVEKVSERLGVDQTGFTGWANVGFDNKGNAIIESGSEGKLTWYDSNKKELLKDTEVRL SRGRQTFEFPHGTFIVREDGTIIVPNYNKSDDTNEVYSLVELVDSSKPPAVKESSDESALEKLKNKHDGSESGSSTGGFS WSSVLGKLSTVLSIMIAAFGIGSMLAKIFNIRIPGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74317; Mature: 74186
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVQRSRFTHLLTTATIAALLPLAPVTAAAEDVEKPVTIATSGKLNWGIRESFNNYTNG CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCC ASKVEDGATLISTNNFEFKLEKATYDAAKERTEAQFRGKIVYLKYCDDMKTFTNCQLDLT CCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCEEEEE IKDPKIVISNEENYVEAVVDSKQYPSGEWYKSNGPVKIANLYPGSATVDSKDNSTEWTNV ECCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHHH VSALANPGGVKMFSEFYGENEGLAPLSFSYDGAGAKPSLLKGGYIQAGNEWKSGQEYSDG HHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC HHKLVDLGDAILVAAGKKGFYLLDNDLKELQKLEVPGLGKVKVGAYDSAAHMYYYVDSKN CCEEEECCCEEEEEECCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEECCC KKDLMGIEVSSTSLGQPKKIATATGNIENIGYHPKTNQVVVISETTSDKYIPLNERETKL CCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCEE GILSGNTFDYKDLPKPKDLFAKDLNGLDVIGTNTPYSMMLDHNDVPEFLPMNDGTFILST EEEECCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEECCCCCEEEEEC SSDMRADTPDSQQLFKGILISIKPDAAGTDADPYAKPMEGSRTNNPELNDLLHIHSNGSL CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCE IVRFDKNEHKDYSFGQILKYTDRDVEKVSERLGVDQTGFTGWANVGFDNKGNAIIESGSE EEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEECCCC GKLTWYDSNKKELLKDTEVRLSRGRQTFEFPHGTFIVREDGTIIVPNYNKSDDTNEVYSL CCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCEEEECCCCCCCCHHHHHHH VELVDSSKPPAVKESSDESALEKLKNKHDGSESGSSTGGFSWSSVLGKLSTVLSIMIAAF HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GIGSMLAKIFNIRIPGIR HHHHHHHHHHHCCCCCCC >Mature Secondary Structure ASVQRSRFTHLLTTATIAALLPLAPVTAAAEDVEKPVTIATSGKLNWGIRESFNNYTNG CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCC ASKVEDGATLISTNNFEFKLEKATYDAAKERTEAQFRGKIVYLKYCDDMKTFTNCQLDLT CCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCEEEEE IKDPKIVISNEENYVEAVVDSKQYPSGEWYKSNGPVKIANLYPGSATVDSKDNSTEWTNV ECCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHHH VSALANPGGVKMFSEFYGENEGLAPLSFSYDGAGAKPSLLKGGYIQAGNEWKSGQEYSDG HHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC HHKLVDLGDAILVAAGKKGFYLLDNDLKELQKLEVPGLGKVKVGAYDSAAHMYYYVDSKN CCEEEECCCEEEEEECCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEECCC KKDLMGIEVSSTSLGQPKKIATATGNIENIGYHPKTNQVVVISETTSDKYIPLNERETKL CCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCEE GILSGNTFDYKDLPKPKDLFAKDLNGLDVIGTNTPYSMMLDHNDVPEFLPMNDGTFILST EEEECCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEECCCCCEEEEEC SSDMRADTPDSQQLFKGILISIKPDAAGTDADPYAKPMEGSRTNNPELNDLLHIHSNGSL CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCE IVRFDKNEHKDYSFGQILKYTDRDVEKVSERLGVDQTGFTGWANVGFDNKGNAIIESGSE EEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEECCCC GKLTWYDSNKKELLKDTEVRLSRGRQTFEFPHGTFIVREDGTIIVPNYNKSDDTNEVYSL CCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCEEEECCCCCCCCHHHHHHH VELVDSSKPPAVKESSDESALEKLKNKHDGSESGSSTGGFSWSSVLGKLSTVLSIMIAAF HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GIGSMLAKIFNIRIPGIR HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA