| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233106
Identifier: 38233106
GI number: 38233106
Start: 460091
End: 460834
Strand: Reverse
Name: 38233106
Synonym: DIP0494
Alternate gene names: NA
Gene position: 460834-460091 (Counterclockwise)
Preceding gene: 38233107
Following gene: 38233105
Centisome position: 18.52
GC content: 51.34
Gene sequence:
>744_bases ATGGGCACGCATACTGAGGCAATGCCAAGCACAACTTTTGCGCAAACTGCCGTGCTGAGCCAACGCCAGCGAGCAACACT GAATGCCTTAAGTGCGTTTCCGCAAGGGGCGCAGGTGTCAGAAATTGCGGCATCACTCGGATTGCATGTCAATACTGTAC GAGGGCACCTAGAAGAGCTGGTAACAAAAAATCTGGTTCGTACCGCTCCCCTGCCGAGTACGGGCAGAGGTCGTCCCGTG TTGATGTACCATGCCACCAGTGCGACCCCAGAAACAGTGGCACAGGAATATCTCTCCCTTATTTCACTGTTAATTCAGCA TATTGACCTCCGGCAACCCGATGAGATCGATGAGGTTGCTAAGGTGCTGGGGAAACAATGGGCTCATAGTATTTTTGCTG ATCATCATCTTGAAGAGCTCAATGGGGAGCAAACGCTCATCACCTTGATCAACTATCTCAGGCACTTAGGGTTTGATCCT GAGGTAGAAAAAACACAGGATCCCACAACCAGCATGTTACAGCTGCGTACTTGTCCTTTTGGTTCCATGGCCCATGCACC ATTGTCCTTTGTGTGCCGAGCACATGAGGGGATGCTCAGTGCTGTAGAAAAAACTGGCGGAATTAGCTTTGAGCTCACAC CATTATCTGCGCCACACCAGTGTTCGATTGTGGCGCAACTTCACGGCAATGAGACTATCCACCGGCAAAGGGGGGAAGAA CATCCACACGCTGGGCATCGCTGA
Upstream 100 bases:
>100_bases ATTTCTGCACGGACATTGGGGATAAAACTGCATAACATTGTTCGTTGCAGTATCAAAACAATGGCAATCACAATTGTGAA AAACTAATGGGAGGGTTCGC
Downstream 100 bases:
>100_bases TCATAGTGTCGGTGTGTGCAGCAGCTCCATCAACGAGAAATGTGGAGCGGTCTAGAACCTGAGCTAAGCTCATTCCGACG GAATTATTGTCGCCATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein ArsR; ArsR Family Transcriptional Regulator
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MGTHTEAMPSTTFAQTAVLSQRQRATLNALSAFPQGAQVSEIAASLGLHVNTVRGHLEELVTKNLVRTAPLPSTGRGRPV LMYHATSATPETVAQEYLSLISLLIQHIDLRQPDEIDEVAKVLGKQWAHSIFADHHLEELNGEQTLITLINYLRHLGFDP EVEKTQDPTTSMLQLRTCPFGSMAHAPLSFVCRAHEGMLSAVEKTGGISFELTPLSAPHQCSIVAQLHGNETIHRQRGEE HPHAGHR
Sequences:
>Translated_247_residues MGTHTEAMPSTTFAQTAVLSQRQRATLNALSAFPQGAQVSEIAASLGLHVNTVRGHLEELVTKNLVRTAPLPSTGRGRPV LMYHATSATPETVAQEYLSLISLLIQHIDLRQPDEIDEVAKVLGKQWAHSIFADHHLEELNGEQTLITLINYLRHLGFDP EVEKTQDPTTSMLQLRTCPFGSMAHAPLSFVCRAHEGMLSAVEKTGGISFELTPLSAPHQCSIVAQLHGNETIHRQRGEE HPHAGHR >Mature_246_residues GTHTEAMPSTTFAQTAVLSQRQRATLNALSAFPQGAQVSEIAASLGLHVNTVRGHLEELVTKNLVRTAPLPSTGRGRPVL MYHATSATPETVAQEYLSLISLLIQHIDLRQPDEIDEVAKVLGKQWAHSIFADHHLEELNGEQTLITLINYLRHLGFDPE VEKTQDPTTSMLQLRTCPFGSMAHAPLSFVCRAHEGMLSAVEKTGGISFELTPLSAPHQCSIVAQLHGNETIHRQRGEEH PHAGHR
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27100; Mature: 26969
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTHTEAMPSTTFAQTAVLSQRQRATLNALSAFPQGAQVSEIAASLGLHVNTVRGHLEEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH VTKNLVRTAPLPSTGRGRPVLMYHATSATPETVAQEYLSLISLLIQHIDLRQPDEIDEVA HHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KVLGKQWAHSIFADHHLEELNGEQTLITLINYLRHLGFDPEVEKTQDPTTSMLQLRTCPF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC GSMAHAPLSFVCRAHEGMLSAVEKTGGISFELTPLSAPHQCSIVAQLHGNETIHRQRGEE CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCHHHHHCCCC HPHAGHR CCCCCCC >Mature Secondary Structure GTHTEAMPSTTFAQTAVLSQRQRATLNALSAFPQGAQVSEIAASLGLHVNTVRGHLEEL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH VTKNLVRTAPLPSTGRGRPVLMYHATSATPETVAQEYLSLISLLIQHIDLRQPDEIDEVA HHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KVLGKQWAHSIFADHHLEELNGEQTLITLINYLRHLGFDPEVEKTQDPTTSMLQLRTCPF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC GSMAHAPLSFVCRAHEGMLSAVEKTGGISFELTPLSAPHQCSIVAQLHGNETIHRQRGEE CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCHHHHHCCCC HPHAGHR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA