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The map label for this gene is ybjY [C]

Identifier: 38233095

GI number: 38233095

Start: 448082

End: 449719

Strand: Direct

Name: ybjY [C]

Synonym: DIP0483

Alternate gene names: 38233095

Gene position: 448082-449719 (Clockwise)

Preceding gene: 38233094

Following gene: 38233096

Centisome position: 18.01

GC content: 55.56

Gene sequence:

>1638_bases
GTGGTTAAAAAAATTGTTATCCCCGCATCGATTGCGGCACTGGTAGCACTCGGCGGCGGGGCTACTTACTTTCTCACAGC
AGGATCCAGTGATCCGGTGGTTGGAGCTAGCGACTACGCAGTGGTGGAAAAGAAGGAAGTCTCACAGTCGATTAACCTTT
CTGGCACACTTGGCCCTAAGCGTGATGTGGTGTTGGCTTCCAAGCTGACTGGCCCAGTGGAGGCCTTGAACGTGAAGGTG
GGGGACCGTATCGAGACAGGCCAGGTGTTGGCCCAGATCAATACGGATAATGAGCGTGGTGAGCTGAACGCTAACTATGC
GCAGCAGGCTCAGAATTATGCGCAGTCGATGGCAGCTGTGGAGCAGGCCCAGTTGCAGTACCAACAGACATGGGATGCGT
TGCATCAAGGCCTCAATGGTGAGGTTAACGGCGCTGAGAATGCGTTGCATGCTGCAGATCATGAGTATGCGGAGGCAAAG
AAGCTTTTTGAGGATTCGCTGCATAACCGTAACGCAGGTATTGATGACGCTCTGAAGGCGCAGGCGAATGCTGTGAACTC
TGCGCGCGATGGTGTAGAAACCGCATCTCTGGATGCGGTGCGTGCAAGTTTCAGTGCTCTCGGTACTGCGCTCAATGGTG
CATCAGAGGATGCTACGGATACGGCCCAGAAGCTGCAGCAGCAGCGAGCTTCCAAGTTGAACACGCAGGCTATTGAGCAG
GGGATTGCGGCCGTCGATAGTGTTAATCGCGCCCGCCAAGCGTGGGATGCGTTGAACCGCGAGCAGAAGAACTACGAAGA
CGCATTGGTCAAGGTGGATCAGTCATTGGCGACGCAGCAGCGTGCGGTGGCAAAGGCTTTCGCTGCGCGTAACGACGCCG
CCCGCGGCCTCGAAACTGCACGTTTGCAGGCGAACAACCAGCTAGCTACTCAAAGCCAGGCCGTGGATCAGGCGATTCGG
GCAGCGGATGCGGGTAACGCGGTTGCAGCGGTGGCGAACCGAAAGTTGGAGCTTTCTATCGGTGAGGCCTCGGTACGAGC
TCCGATTCGTGGCGTGGTGACATCTGTGACTGGTCAAGTAGGCAAGCCTGTAGAAGGTGCGTTGCTGACCATCGCGGACG
ATACAGACATGCTGGTGCGTGGCACGGTGTCGGAGGCCGACGTTGCGAAAATCAAGGTAGGCAACGAGGTTTCCTTTACC
ACTCCGGCTACCGGAACTAAACAGTTCAAAGGCCGCGTGAGTGCGGTATCGACCGCTGCAGAATCTAACGCCGGGGAACC
GGAGAAAAAAACCAAGAAGGCTCAGTTCCCGATCGAGATCACGGTATCTGGTGACCGCGACGGCCTGCTGTTGGGTGGCT
CCGGCAAAGCCAAGATTGTGACCGCTAAATCAAAGCCTGGACTAGCTGTTCCGAAGGAAGCCGTGTTTGAAGAAGACGGC
ACCTCTTATGTGCTTGCCATCGACGGTTCTGACGAGGGCACGAAGGTTCTTAAGAAAGTGGCAGTGACTCTTGGTAAGGG
CAATGACTTTGAGACCACTGTGGAATCGAAGGATCTCAAGGCTCAAGACCTCGTGATTAAGGCTCCTGACCTGTATAAGA
ATTATGAGGGCGTTTCGGTGTCCGTCGATAAGCGCTAG

Upstream 100 bases:

>100_bases
TGCTATGCCGCAAAATTCTATTTAATGAACAATGTTATACTTTTGGAATCTAGATTGATTCCCTCACCTCGCTTTTTAAA
TACAAGGACAAGGCGCGCAC

Downstream 100 bases:

>100_bases
TGCGGAGGTCAGTGCAATGGCAGAGCAACTGATCAAGATGCGCGGGATTGTTAAGCGCTTTAACATCGGGCAACCCGGCG
AATTGCAGGTGCTGCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: HylD Family Protein; RND Family Efflux Transporter MFP Subunit; Efflux System Protein; Efflux Transporter Rnd Family Mfp Subunit; Secreted Protein

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MVKKIVIPASIAALVALGGGATYFLTAGSSDPVVGASDYAVVEKKEVSQSINLSGTLGPKRDVVLASKLTGPVEALNVKV
GDRIETGQVLAQINTDNERGELNANYAQQAQNYAQSMAAVEQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAK
KLFEDSLHNRNAGIDDALKAQANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTAQKLQQQRASKLNTQAIEQ
GIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQRAVAKAFAARNDAARGLETARLQANNQLATQSQAVDQAIR
AADAGNAVAAVANRKLELSIGEASVRAPIRGVVTSVTGQVGKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSFT
TPATGTKQFKGRVSAVSTAAESNAGEPEKKTKKAQFPIEITVSGDRDGLLLGGSGKAKIVTAKSKPGLAVPKEAVFEEDG
TSYVLAIDGSDEGTKVLKKVAVTLGKGNDFETTVESKDLKAQDLVIKAPDLYKNYEGVSVSVDKR

Sequences:

>Translated_545_residues
MVKKIVIPASIAALVALGGGATYFLTAGSSDPVVGASDYAVVEKKEVSQSINLSGTLGPKRDVVLASKLTGPVEALNVKV
GDRIETGQVLAQINTDNERGELNANYAQQAQNYAQSMAAVEQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAK
KLFEDSLHNRNAGIDDALKAQANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTAQKLQQQRASKLNTQAIEQ
GIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQRAVAKAFAARNDAARGLETARLQANNQLATQSQAVDQAIR
AADAGNAVAAVANRKLELSIGEASVRAPIRGVVTSVTGQVGKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSFT
TPATGTKQFKGRVSAVSTAAESNAGEPEKKTKKAQFPIEITVSGDRDGLLLGGSGKAKIVTAKSKPGLAVPKEAVFEEDG
TSYVLAIDGSDEGTKVLKKVAVTLGKGNDFETTVESKDLKAQDLVIKAPDLYKNYEGVSVSVDKR
>Mature_545_residues
MVKKIVIPASIAALVALGGGATYFLTAGSSDPVVGASDYAVVEKKEVSQSINLSGTLGPKRDVVLASKLTGPVEALNVKV
GDRIETGQVLAQINTDNERGELNANYAQQAQNYAQSMAAVEQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAK
KLFEDSLHNRNAGIDDALKAQANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTAQKLQQQRASKLNTQAIEQ
GIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQRAVAKAFAARNDAARGLETARLQANNQLATQSQAVDQAIR
AADAGNAVAAVANRKLELSIGEASVRAPIRGVVTSVTGQVGKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSFT
TPATGTKQFKGRVSAVSTAAESNAGEPEKKTKKAQFPIEITVSGDRDGLLLGGSGKAKIVTAKSKPGLAVPKEAVFEEDG
TSYVLAIDGSDEGTKVLKKVAVTLGKGNDFETTVESKDLKAQDLVIKAPDLYKNYEGVSVSVDKR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57150; Mature: 57150

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKIVIPASIAALVALGGGATYFLTAGSSDPVVGASDYAVVEKKEVSQSINLSGTLGPK
CCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
RDVVLASKLTGPVEALNVKVGDRIETGQVLAQINTDNERGELNANYAQQAQNYAQSMAAV
CCEEEECCCCCCHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
EQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAKKLFEDSLHNRNAGIDDALKA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
QANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTAQKLQQQRASKLNTQAIEQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
GIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQRAVAKAFAARNDAARGLETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHH
RLQANNQLATQSQAVDQAIRAADAGNAVAAVANRKLELSIGEASVRAPIRGVVTSVTGQV
HHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHCHHHHHHHHHHCCC
GKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSFTTPATGTKQFKGRVSAVSTAA
CCCCCCEEEEEECCCCEEEECCCCCCCEEEEEECCEEEECCCCCCCHHHHCHHHHHHHHH
ESNAGEPEKKTKKAQFPIEITVSGDRDGLLLGGSGKAKIVTAKSKPGLAVPKEAVFEEDG
HCCCCCCHHHHHCCCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCC
TSYVLAIDGSDEGTKVLKKVAVTLGKGNDFETTVESKDLKAQDLVIKAPDLYKNYEGVSV
CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCEE
SVDKR
EECCC
>Mature Secondary Structure
MVKKIVIPASIAALVALGGGATYFLTAGSSDPVVGASDYAVVEKKEVSQSINLSGTLGPK
CCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
RDVVLASKLTGPVEALNVKVGDRIETGQVLAQINTDNERGELNANYAQQAQNYAQSMAAV
CCEEEECCCCCCHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
EQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAKKLFEDSLHNRNAGIDDALKA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
QANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTAQKLQQQRASKLNTQAIEQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
GIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQRAVAKAFAARNDAARGLETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHH
RLQANNQLATQSQAVDQAIRAADAGNAVAAVANRKLELSIGEASVRAPIRGVVTSVTGQV
HHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHCHHHHHHHHHHCCC
GKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSFTTPATGTKQFKGRVSAVSTAA
CCCCCCEEEEEECCCCEEEECCCCCCCEEEEEECCEEEECCCCCCCHHHHCHHHHHHHHH
ESNAGEPEKKTKKAQFPIEITVSGDRDGLLLGGSGKAKIVTAKSKPGLAVPKEAVFEEDG
HCCCCCCHHHHHCCCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCC
TSYVLAIDGSDEGTKVLKKVAVTLGKGNDFETTVESKDLKAQDLVIKAPDLYKNYEGVSV
CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCEE
SVDKR
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA