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The map label for this gene is ccdA [H]

Identifier: 38233026

GI number: 38233026

Start: 378797

End: 379588

Strand: Direct

Name: ccdA [H]

Synonym: DIP0412

Alternate gene names: 38233026

Gene position: 378797-379588 (Clockwise)

Preceding gene: 38233025

Following gene: 38233027

Centisome position: 15.22

GC content: 52.9

Gene sequence:

>792_bases
ATGAATATTCTCGCTAGTGGACTAGGGGAAAGCGTCGCAGATGTCGCTTCCTCTGGTCCTCTCCTTTTAGGTATTTTGGC
CGCTGCATTGGCAGGTTTTGTTTCCTTCGCGAGTCCTTGCGTCATCCCGCTTGTTCCTGGTTACATGTCCTATCTTGCAG
GCGTTGTGGGCGCAGAAGTCGAGCTCAGTGAGACTGGCCCTCGGGTGCGCACTCGTCGATGGCGAGTTGTTGGTGCGGCT
TTATTGTTCGTCCTTGGTTTCACGGTGGTATTTACTTTGGCCACGGCCACTGTTTTTGGTGCGATTAGTGCTCTGACATT
AAATGCTGGCACTTTGATGCGTATTGGCGGTGTGGTCACTATCGTCATGGGGCTTGTGTTCATGGGTGCGGTTCCGATGT
TGCAGGAAGAGCACCGTTTTTCTCCTCGTCGGTGGTCGACAATTCTGGGTGCCCCGCTTCTGGGTGGAGTTTTCGCTTTG
GGCTGGACTCCATGTTTGGGGCCTACGCTCGCCGCAATTATTTCTGTTTCCGCAGGTACTGAGGGTATGACCGCGTTGCG
AGGTGTGCTGCTCATTATTGGCTATTGCGTGGGTTTGGGCATTCCTTTCCTTATTGTTGCGTTGGGTTCTGCTCGCGTGA
TGATGGGTCTGCGTAAGTATTCCCGCATTATTCAAATCATCGGCGGTTGTGCGTTGGTTTTGGTGGGGCTGGCGTTGGTG
TCTGGGCAGTGGGCTCATTTTATTAACTGGGTACGTCAATGGACCGTCGAGTACGGTGCCACGTTGATTTAA

Upstream 100 bases:

>100_bases
TTCCTACTACCATCGTTTTGGATAAACAGCACCGCCCAGCGGCAGTGTTTCTCCGTGAGGTAACTGCCCAGGATCTGATC
AAGGTTATTGATTCTCTCTC

Downstream 100 bases:

>100_bases
AAGGAATCATGGTGCGTTATTTAAAAAAGGCTTGGCATTGGCTGACCAGTATGCGTACGGCTCTTGCCCTGTTATTCATT
TTGGCGGTTGCCGCTATCCC

Product: putative cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNILASGLGESVADVASSGPLLLGILAAALAGFVSFASPCVIPLVPGYMSYLAGVVGAEVELSETGPRVRTRRWRVVGAA
LLFVLGFTVVFTLATATVFGAISALTLNAGTLMRIGGVVTIVMGLVFMGAVPMLQEEHRFSPRRWSTILGAPLLGGVFAL
GWTPCLGPTLAAIISVSAGTEGMTALRGVLLIIGYCVGLGIPFLIVALGSARVMMGLRKYSRIIQIIGGCALVLVGLALV
SGQWAHFINWVRQWTVEYGATLI

Sequences:

>Translated_263_residues
MNILASGLGESVADVASSGPLLLGILAAALAGFVSFASPCVIPLVPGYMSYLAGVVGAEVELSETGPRVRTRRWRVVGAA
LLFVLGFTVVFTLATATVFGAISALTLNAGTLMRIGGVVTIVMGLVFMGAVPMLQEEHRFSPRRWSTILGAPLLGGVFAL
GWTPCLGPTLAAIISVSAGTEGMTALRGVLLIIGYCVGLGIPFLIVALGSARVMMGLRKYSRIIQIIGGCALVLVGLALV
SGQWAHFINWVRQWTVEYGATLI
>Mature_263_residues
MNILASGLGESVADVASSGPLLLGILAAALAGFVSFASPCVIPLVPGYMSYLAGVVGAEVELSETGPRVRTRRWRVVGAA
LLFVLGFTVVFTLATATVFGAISALTLNAGTLMRIGGVVTIVMGLVFMGAVPMLQEEHRFSPRRWSTILGAPLLGGVFAL
GWTPCLGPTLAAIISVSAGTEGMTALRGVLLIIGYCVGLGIPFLIVALGSARVMMGLRKYSRIIQIIGGCALVLVGLALV
SGQWAHFINWVRQWTVEYGATLI

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 27374; Mature: 27374

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]