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The map label for this gene is yxaH [H]

Identifier: 38233020

GI number: 38233020

Start: 372700

End: 373818

Strand: Reverse

Name: yxaH [H]

Synonym: DIP0406

Alternate gene names: 38233020

Gene position: 373818-372700 (Counterclockwise)

Preceding gene: 38233029

Following gene: 38233018

Centisome position: 15.02

GC content: 54.69

Gene sequence:

>1119_bases
ATGGATCAAAAACGACCCCGCATGATGGCCCCCGACGTAGCCCGCGGCCTCGCCCTCCTTGGTATCGCAATGGCGAACAT
CCCCTCAGCATGGATGGGAGTAGGAATTTTCGGCCAAGTAAACTCCACGCTCGATAAAACCGCAGTGCTGTTCTCCGCCA
TGTTCGTCCATAACCGCGGACTACCTATGTTCTCCACGTTGCTCGGATTCGGCGTCGGTTTGATCACCATCAGCATGATC
CGCAAACACTTCAGCCTTTCCCAGGCCCGCGGTGCGCTGATCAAACGCTACCTGTTCCTCACCATGTTCGGCGTGATCCA
CTGCCTCCTGCTCTTCTTTGGCGACATCATGACTTTCTACGGCCTTGCTGCCGTCATCATCGCCACCATGCTGCCCCTTA
AAGACACAACCATTCGACTGATCGCCTACATTTTGTTCGGTCTTACGGGTATCTTCGCAGCACTCCTGATGGCATTCCCC
ACCGCAGCACAAATCTTGACCAGCGATGCAGGCATGGCATCCGATACAGCCCTAGAGTATTACGGCACAAACATAGCTGT
ACTTATTTCAAGCCTCGTCATGTTCCCGCTCCAAGCAATGCTCTATCTGCCCATCATGCTCATCGGCTACAGCTGGGCTA
GGCGCGGCGTACTAGCAGACGTCCACCAACACCGCACCGAGCTTTACATTTGGTCCGGCATCGCAATCGCCATCATTATC
GGAATCGGCATCCCATGGGGCCTTACCCAATCCCATACTCTCACAGTCCTCAACTTCTCGATCGGACAGCTCTCCGGCCC
AGGGATTCTAGCCATCTGCGCGCTGAGCGTCGACAAGATCAAACCATCATGGCTCACCCCGTTTGCGGCCCTAGGTAAGC
GTTCCATGAGTGGTTACCTCATGCAGTCGATCCTGTGCTACCCACTATTTTTGGGATTCACATTGGGGATTAAGGCATCG
GCAGCTGGCATTCTTGGCTACGCCTTCGGTATCTGGCTGATCACACTGCTGCTGGCCTGCCTACTAGAAAAGAAAAACCT
GCGAGGGCCATTCGAATGGCTCCACCGCAGGCTGTCATACGGACCAACGCTTCAGCTTACAAATTCCTCGTCCACGTAG

Upstream 100 bases:

>100_bases
GCGGCGTCAAGAATAGGATTGGGCATGCTCACCATCATGCCCAACTTTTGGATGATATGAAAGCAAGGCGTACCTACTTG
GATGCCTTAGTATCTAACCC

Downstream 100 bases:

>100_bases
AACGCACCTCAATCACGATGGTCGCACCCAACATAAACAGGCTTGCGATCATCGGGTGCAACACCCCAGAAATAGCGGCA
ACAATCGCCGCCACGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MDQKRPRMMAPDVARGLALLGIAMANIPSAWMGVGIFGQVNSTLDKTAVLFSAMFVHNRGLPMFSTLLGFGVGLITISMI
RKHFSLSQARGALIKRYLFLTMFGVIHCLLLFFGDIMTFYGLAAVIIATMLPLKDTTIRLIAYILFGLTGIFAALLMAFP
TAAQILTSDAGMASDTALEYYGTNIAVLISSLVMFPLQAMLYLPIMLIGYSWARRGVLADVHQHRTELYIWSGIAIAIII
GIGIPWGLTQSHTLTVLNFSIGQLSGPGILAICALSVDKIKPSWLTPFAALGKRSMSGYLMQSILCYPLFLGFTLGIKAS
AAGILGYAFGIWLITLLLACLLEKKNLRGPFEWLHRRLSYGPTLQLTNSSST

Sequences:

>Translated_372_residues
MDQKRPRMMAPDVARGLALLGIAMANIPSAWMGVGIFGQVNSTLDKTAVLFSAMFVHNRGLPMFSTLLGFGVGLITISMI
RKHFSLSQARGALIKRYLFLTMFGVIHCLLLFFGDIMTFYGLAAVIIATMLPLKDTTIRLIAYILFGLTGIFAALLMAFP
TAAQILTSDAGMASDTALEYYGTNIAVLISSLVMFPLQAMLYLPIMLIGYSWARRGVLADVHQHRTELYIWSGIAIAIII
GIGIPWGLTQSHTLTVLNFSIGQLSGPGILAICALSVDKIKPSWLTPFAALGKRSMSGYLMQSILCYPLFLGFTLGIKAS
AAGILGYAFGIWLITLLLACLLEKKNLRGPFEWLHRRLSYGPTLQLTNSSST
>Mature_372_residues
MDQKRPRMMAPDVARGLALLGIAMANIPSAWMGVGIFGQVNSTLDKTAVLFSAMFVHNRGLPMFSTLLGFGVGLITISMI
RKHFSLSQARGALIKRYLFLTMFGVIHCLLLFFGDIMTFYGLAAVIIATMLPLKDTTIRLIAYILFGLTGIFAALLMAFP
TAAQILTSDAGMASDTALEYYGTNIAVLISSLVMFPLQAMLYLPIMLIGYSWARRGVLADVHQHRTELYIWSGIAIAIII
GIGIPWGLTQSHTLTVLNFSIGQLSGPGILAICALSVDKIKPSWLTPFAALGKRSMSGYLMQSILCYPLFLGFTLGIKAS
AAGILGYAFGIWLITLLLACLLEKKNLRGPFEWLHRRLSYGPTLQLTNSSST

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 40515; Mature: 40515

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQKRPRMMAPDVARGLALLGIAMANIPSAWMGVGIFGQVNSTLDKTAVLFSAMFVHNRG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LPMFSTLLGFGVGLITISMIRKHFSLSQARGALIKRYLFLTMFGVIHCLLLFFGDIMTFY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAAVIIATMLPLKDTTIRLIAYILFGLTGIFAALLMAFPTAAQILTSDAGMASDTALEY
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YGTNIAVLISSLVMFPLQAMLYLPIMLIGYSWARRGVLADVHQHRTELYIWSGIAIAIII
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECHHHHHHHH
GIGIPWGLTQSHTLTVLNFSIGQLSGPGILAICALSVDKIKPSWLTPFAALGKRSMSGYL
HCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
MQSILCYPLFLGFTLGIKASAAGILGYAFGIWLITLLLACLLEKKNLRGPFEWLHRRLSY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
GPTLQLTNSSST
CCEEEECCCCCC
>Mature Secondary Structure
MDQKRPRMMAPDVARGLALLGIAMANIPSAWMGVGIFGQVNSTLDKTAVLFSAMFVHNRG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LPMFSTLLGFGVGLITISMIRKHFSLSQARGALIKRYLFLTMFGVIHCLLLFFGDIMTFY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAAVIIATMLPLKDTTIRLIAYILFGLTGIFAALLMAFPTAAQILTSDAGMASDTALEY
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YGTNIAVLISSLVMFPLQAMLYLPIMLIGYSWARRGVLADVHQHRTELYIWSGIAIAIII
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECHHHHHHHH
GIGIPWGLTQSHTLTVLNFSIGQLSGPGILAICALSVDKIKPSWLTPFAALGKRSMSGYL
HCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
MQSILCYPLFLGFTLGIKASAAGILGYAFGIWLITLLLACLLEKKNLRGPFEWLHRRLSY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
GPTLQLTNSSST
CCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]