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The map label for this gene is 38232985

Identifier: 38232985

GI number: 38232985

Start: 336275

End: 337699

Strand: Reverse

Name: 38232985

Synonym: DIP0369

Alternate gene names: NA

Gene position: 337699-336275 (Counterclockwise)

Preceding gene: 38232994

Following gene: 38232983

Centisome position: 13.57

GC content: 54.95

Gene sequence:

>1425_bases
ATGGGTATGACTTATGTGGGTTCACGCCTGCGCCAGCTGCGCAAAGAACGCGACCTCACCCAAGCCGCGCTTGCCGAACT
CCTCGGAATCTCAGCCAGCTATATCAACCAGATCGAACACGACGTCCGACCACTTACCCCACAAGTGCTGCGGAAAATAA
CAGCCTCATTCGGGGTGGACGCCACCTTCTTTTCGCGCGACGATTCCTCACGCCTCATCGCCGAGCTTCACGACGTCATG
TTCGACAAGGAAGTCTGCCCGCAGCCTATCGACGTCACCGAGCTGTCCACCCTCGTAGACCACCACCCCGAAGCTGCTCG
CGCCATGGTGGAGATGCATCGTCGCTATCGACGCCTCCGCGACAACCTTGATGCGGTTACCGACAAACGCCGTCTCAGCG
GATTAGATACTCCCAATCCACTGGCAGTGTTGTCCATGCCTCACGATGAGGTGCGCGACTTCTTCTACTCTCACCACAAT
TACCTCGACGAACTAGATCGGATCGCCGAACGCATTGCCACAGAGCTAGGCATTACTACTTTTAATATTCGAGCCAACGA
AGCAGCACTGACTCAACGCCTGCAAGAAGACCATGATGTAAAGATCATCCCCAGCGTTGACCTCGGCGCCACGTTGCATA
AGTTTGACAATGTTTCTCGCCAACTTACGCTGTCGACTCGCCTTATTGCTGGCCAGCGCGCATTTAGGCTTGCCGCAGAG
CTGGGGTATCTTGAAGCTGGCGAACAGATGCATGCACTTGTTGCCGATGGACATTTCCAATCGGAGGAGGCGCGTCGATT
AGCGCTTCGTGGCATCGCCTCCTACTTTGCTGCGGCGGTGATGTTGCCTTATGGCATATTCCACCAGCAGGCGGAAAAAT
GCGGTTACGACATCGAATACCTCTGTCAAGTGTTTGGGCTGGGGTATGAGACGGTCTGCCATCGGCTTTCAACCTTGCAG
CGCCCTCAACTCAAAGGCATCCCGTTTACGTTTGTCCGCGTGGATCGGGCCGGTAATATCTCCAAGCGGCAATCGGCCAC
TGGTTTTCATTTCACGCATTCGGGAGGCACATGTCCACTGTGGAATGTGTATGAGGCATTTAGTAGCCCAGGCACGATCA
TGCGGCAGCTTTCTGAGATGCCTGATGGCCGTAGTTATCTTTGGATTGCGCGCACGGTTCGCCACCATCAAGGGCGGTTT
AGCGAGCCAGGAAAGATCTTTTCTATTGGTCTTGGCTGCGAAGCCCGTCACGCGCATCGTACCGTTTATACTGCTGGGCT
AGATTTAGACGGTTTTAGCAATGCGGTCCCCATCGGCGCTGGTTGCCGCGTATGTTCGCGAACAAATTGCCCTCAGCGAG
CTTTCCCCGCGGTGAATACCTTGCTCAGCATTGATCCCCATGCTTCCCAAGTCGCGCCTTATTAA

Upstream 100 bases:

>100_bases
AAATAGCCCATGAGACAGAAGTGACAGTTGTGTACTGCGCACCACAGTCGATTTTTGAATAATCATCCACCATGGCGCAG
CTCACGTAGTGTAGAAACCC

Downstream 100 bases:

>100_bases
TCATCTCGACCATCAGCTGTTTAAGCTCTGGGTCTTCGCGCACCAATTGAACTAATTGGCAGTCGTTTGGGCCCGAGGTT
CCAGGTTGGCATGCGGTGCA

Product: putative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MGMTYVGSRLRQLRKERDLTQAALAELLGISASYINQIEHDVRPLTPQVLRKITASFGVDATFFSRDDSSRLIAELHDVM
FDKEVCPQPIDVTELSTLVDHHPEAARAMVEMHRRYRRLRDNLDAVTDKRRLSGLDTPNPLAVLSMPHDEVRDFFYSHHN
YLDELDRIAERIATELGITTFNIRANEAALTQRLQEDHDVKIIPSVDLGATLHKFDNVSRQLTLSTRLIAGQRAFRLAAE
LGYLEAGEQMHALVADGHFQSEEARRLALRGIASYFAAAVMLPYGIFHQQAEKCGYDIEYLCQVFGLGYETVCHRLSTLQ
RPQLKGIPFTFVRVDRAGNISKRQSATGFHFTHSGGTCPLWNVYEAFSSPGTIMRQLSEMPDGRSYLWIARTVRHHQGRF
SEPGKIFSIGLGCEARHAHRTVYTAGLDLDGFSNAVPIGAGCRVCSRTNCPQRAFPAVNTLLSIDPHASQVAPY

Sequences:

>Translated_474_residues
MGMTYVGSRLRQLRKERDLTQAALAELLGISASYINQIEHDVRPLTPQVLRKITASFGVDATFFSRDDSSRLIAELHDVM
FDKEVCPQPIDVTELSTLVDHHPEAARAMVEMHRRYRRLRDNLDAVTDKRRLSGLDTPNPLAVLSMPHDEVRDFFYSHHN
YLDELDRIAERIATELGITTFNIRANEAALTQRLQEDHDVKIIPSVDLGATLHKFDNVSRQLTLSTRLIAGQRAFRLAAE
LGYLEAGEQMHALVADGHFQSEEARRLALRGIASYFAAAVMLPYGIFHQQAEKCGYDIEYLCQVFGLGYETVCHRLSTLQ
RPQLKGIPFTFVRVDRAGNISKRQSATGFHFTHSGGTCPLWNVYEAFSSPGTIMRQLSEMPDGRSYLWIARTVRHHQGRF
SEPGKIFSIGLGCEARHAHRTVYTAGLDLDGFSNAVPIGAGCRVCSRTNCPQRAFPAVNTLLSIDPHASQVAPY
>Mature_473_residues
GMTYVGSRLRQLRKERDLTQAALAELLGISASYINQIEHDVRPLTPQVLRKITASFGVDATFFSRDDSSRLIAELHDVMF
DKEVCPQPIDVTELSTLVDHHPEAARAMVEMHRRYRRLRDNLDAVTDKRRLSGLDTPNPLAVLSMPHDEVRDFFYSHHNY
LDELDRIAERIATELGITTFNIRANEAALTQRLQEDHDVKIIPSVDLGATLHKFDNVSRQLTLSTRLIAGQRAFRLAAEL
GYLEAGEQMHALVADGHFQSEEARRLALRGIASYFAAAVMLPYGIFHQQAEKCGYDIEYLCQVFGLGYETVCHRLSTLQR
PQLKGIPFTFVRVDRAGNISKRQSATGFHFTHSGGTCPLWNVYEAFSSPGTIMRQLSEMPDGRSYLWIARTVRHHQGRFS
EPGKIFSIGLGCEARHAHRTVYTAGLDLDGFSNAVPIGAGCRVCSRTNCPQRAFPAVNTLLSIDPHASQVAPY

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 53207; Mature: 53076

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50943 HTH_CROC1 ; PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMTYVGSRLRQLRKERDLTQAALAELLGISASYINQIEHDVRPLTPQVLRKITASFGVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
ATFFSRDDSSRLIAELHDVMFDKEVCPQPIDVTELSTLVDHHPEAARAMVEMHRRYRRLR
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DNLDAVTDKRRLSGLDTPNPLAVLSMPHDEVRDFFYSHHNYLDELDRIAERIATELGITT
HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
FNIRANEAALTQRLQEDHDVKIIPSVDLGATLHKFDNVSRQLTLSTRLIAGQRAFRLAAE
EEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCHHHHEEHHHHHHHHHHHHHHHHH
LGYLEAGEQMHALVADGHFQSEEARRLALRGIASYFAAAVMLPYGIFHQQAEKCGYDIEY
HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LCQVFGLGYETVCHRLSTLQRPQLKGIPFTFVRVDRAGNISKRQSATGFHFTHSGGTCPL
HHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCCCEEEECCCCCCCH
WNVYEAFSSPGTIMRQLSEMPDGRSYLWIARTVRHHQGRFSEPGKIFSIGLGCEARHAHR
HHHHHHHCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHCC
TVYTAGLDLDGFSNAVPIGAGCRVCSRTNCPQRAFPAVNTLLSIDPHASQVAPY
EEEEECCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHEECCCCCHHCCCC
>Mature Secondary Structure 
GMTYVGSRLRQLRKERDLTQAALAELLGISASYINQIEHDVRPLTPQVLRKITASFGVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
ATFFSRDDSSRLIAELHDVMFDKEVCPQPIDVTELSTLVDHHPEAARAMVEMHRRYRRLR
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DNLDAVTDKRRLSGLDTPNPLAVLSMPHDEVRDFFYSHHNYLDELDRIAERIATELGITT
HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
FNIRANEAALTQRLQEDHDVKIIPSVDLGATLHKFDNVSRQLTLSTRLIAGQRAFRLAAE
EEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCHHHHEEHHHHHHHHHHHHHHHHH
LGYLEAGEQMHALVADGHFQSEEARRLALRGIASYFAAAVMLPYGIFHQQAEKCGYDIEY
HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LCQVFGLGYETVCHRLSTLQRPQLKGIPFTFVRVDRAGNISKRQSATGFHFTHSGGTCPL
HHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCCCEEEECCCCCCCH
WNVYEAFSSPGTIMRQLSEMPDGRSYLWIARTVRHHQGRFSEPGKIFSIGLGCEARHAHR
HHHHHHHCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHCC
TVYTAGLDLDGFSNAVPIGAGCRVCSRTNCPQRAFPAVNTLLSIDPHASQVAPY
EEEEECCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]