| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232966
Identifier: 38232966
GI number: 38232966
Start: 310129
End: 311286
Strand: Reverse
Name: 38232966
Synonym: DIP0348
Alternate gene names: NA
Gene position: 311286-310129 (Counterclockwise)
Preceding gene: 38232968
Following gene: 38232960
Centisome position: 12.51
GC content: 51.3
Gene sequence:
>1158_bases ATGTCGATTTTTCGCCCAAAAATCGACATTACTCACCAATATGTTTATTCTTTCGACATGAGCAGCACCACGTTCGACCC CAACCGTCCTTTCAACGAGCTTCCACCTCTACCCCCTGCCCAAGTCGTCGAAACCGTTCCGGTGCTCAAAGCGATTATTG CTGCAAAAGAAAAGCTTGCTGAGCTACGCACCGCTTGCCAGCTTATTCCCAATCCGGAGATTCTTACTTCCACGATTCCG TTGCGCGAAGCACGCGCGTCTACAGAAATCGAAAACATCGTAACCACAAACGATGAGCTTTTCCGCGCTGCCTGGAACGT TGACGCAGAGCCGACCCCGGCAACTAAAGAAGCTCTGCGCTATAACGCCGCCTTGCATGCGGGCTTGGAATCGATCGGTC AACGGCCACTATCTGCCAAGACCACGCAAATAGTCTGCGGAACTTTGCAAAGCGATGAACCGCACATTGCGCCGTTTCGC TCTTACCCTGGAACATTCATCGGTAACCCGCATACGCAACAGCGCATCTACACTCCACCTGAAGGGCGAGAAGTGATTGA GCAGCACTTATCGCGTTGGGAGCGCTATATCTATAACGAGCATGACGTTGATTCTTTGGTAAAGATGGCTCTGCTGCATT ATCAGTTCGAAGCCATCCACCCGTTTACCGACGGTAACGGACGCACAGGGCGTATCCTCAATGTGCTGTATCTGCTGCAA GAAGCCCTGCTTCCGTTCCCTGTGCTTTATTTATCCGGCTATATCGTGGAGAACAAGGCGCAATATTATCGTTGCTTGAA CCGAGTGACAACGGAATCTGCCTGGGAAGATTGGCTTTTGTTTATGGTCCGCGGCGTGGAGGTTGCAGCCACCGACGCCG CTACTATGATCGCGGACTTACGTCAGGTACAAGATGAGATCACGGCTGTTATCCGCGATGCGGGCATTATTAGTCCGGCT AAAGAAATATCTGAAATCACGATGGTGCGCCCGTACCTACGCATTCAGGATGTGGAAGACAGCGGACTAGTGAAAAGACA AACGGCTGCAACGTGGCTTAATCATCTGGTTGATATTGGGGTGTTGAGTGAAACTAAACGAGGCCGTCAGCGCATTTTCA TTAACGATGCCGCATTGCGCGTACTCACGCGGGAGTAA
Upstream 100 bases:
>100_bases TGGGTGGCAACCCACAGCGGGCAGCAACTGCTCAGCTGTCGGCTCCCCGGCGACGAGCGCGCCCCCGATATGTTTACGCA ATCGACATTAGAGATGTTTA
Downstream 100 bases:
>100_bases GGTCCACGACGACTTTAAGTCTGTCTATGCTTGCCGACGCCACCGCCCTGGTGCCCCGCCCAGTAGCCAGAAGCAGTACG GTGTGCCGAAGGCGTCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSIFRPKIDITHQYVYSFDMSSTTFDPNRPFNELPPLPPAQVVETVPVLKAIIAAKEKLAELRTACQLIPNPEILTSTIP LREARASTEIENIVTTNDELFRAAWNVDAEPTPATKEALRYNAALHAGLESIGQRPLSAKTTQIVCGTLQSDEPHIAPFR SYPGTFIGNPHTQQRIYTPPEGREVIEQHLSRWERYIYNEHDVDSLVKMALLHYQFEAIHPFTDGNGRTGRILNVLYLLQ EALLPFPVLYLSGYIVENKAQYYRCLNRVTTESAWEDWLLFMVRGVEVAATDAATMIADLRQVQDEITAVIRDAGIISPA KEISEITMVRPYLRIQDVEDSGLVKRQTAATWLNHLVDIGVLSETKRGRQRIFINDAALRVLTRE
Sequences:
>Translated_385_residues MSIFRPKIDITHQYVYSFDMSSTTFDPNRPFNELPPLPPAQVVETVPVLKAIIAAKEKLAELRTACQLIPNPEILTSTIP LREARASTEIENIVTTNDELFRAAWNVDAEPTPATKEALRYNAALHAGLESIGQRPLSAKTTQIVCGTLQSDEPHIAPFR SYPGTFIGNPHTQQRIYTPPEGREVIEQHLSRWERYIYNEHDVDSLVKMALLHYQFEAIHPFTDGNGRTGRILNVLYLLQ EALLPFPVLYLSGYIVENKAQYYRCLNRVTTESAWEDWLLFMVRGVEVAATDAATMIADLRQVQDEITAVIRDAGIISPA KEISEITMVRPYLRIQDVEDSGLVKRQTAATWLNHLVDIGVLSETKRGRQRIFINDAALRVLTRE >Mature_384_residues SIFRPKIDITHQYVYSFDMSSTTFDPNRPFNELPPLPPAQVVETVPVLKAIIAAKEKLAELRTACQLIPNPEILTSTIPL REARASTEIENIVTTNDELFRAAWNVDAEPTPATKEALRYNAALHAGLESIGQRPLSAKTTQIVCGTLQSDEPHIAPFRS YPGTFIGNPHTQQRIYTPPEGREVIEQHLSRWERYIYNEHDVDSLVKMALLHYQFEAIHPFTDGNGRTGRILNVLYLLQE ALLPFPVLYLSGYIVENKAQYYRCLNRVTTESAWEDWLLFMVRGVEVAATDAATMIADLRQVQDEITAVIRDAGIISPAK EISEITMVRPYLRIQDVEDSGLVKRQTAATWLNHLVDIGVLSETKRGRQRIFINDAALRVLTRE
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 43593; Mature: 43462
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFRPKIDITHQYVYSFDMSSTTFDPNRPFNELPPLPPAQVVETVPVLKAIIAAKEKLA CCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ELRTACQLIPNPEILTSTIPLREARASTEIENIVTTNDELFRAAWNVDAEPTPATKEALR HHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHH YNAALHAGLESIGQRPLSAKTTQIVCGTLQSDEPHIAPFRSYPGTFIGNPHTQQRIYTPP HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC EGREVIEQHLSRWERYIYNEHDVDSLVKMALLHYQFEAIHPFTDGNGRTGRILNVLYLLQ CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH EALLPFPVLYLSGYIVENKAQYYRCLNRVTTESAWEDWLLFMVRGVEVAATDAATMIADL HHHHCHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RQVQDEITAVIRDAGIISPAKEISEITMVRPYLRIQDVEDSGLVKRQTAATWLNHLVDIG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH VLSETKRGRQRIFINDAALRVLTRE HHHHHHCCCEEEEEEHHHHHHEECC >Mature Secondary Structure SIFRPKIDITHQYVYSFDMSSTTFDPNRPFNELPPLPPAQVVETVPVLKAIIAAKEKLA CCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ELRTACQLIPNPEILTSTIPLREARASTEIENIVTTNDELFRAAWNVDAEPTPATKEALR HHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHH YNAALHAGLESIGQRPLSAKTTQIVCGTLQSDEPHIAPFRSYPGTFIGNPHTQQRIYTPP HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC EGREVIEQHLSRWERYIYNEHDVDSLVKMALLHYQFEAIHPFTDGNGRTGRILNVLYLLQ CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH EALLPFPVLYLSGYIVENKAQYYRCLNRVTTESAWEDWLLFMVRGVEVAATDAATMIADL HHHHCHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RQVQDEITAVIRDAGIISPAKEISEITMVRPYLRIQDVEDSGLVKRQTAATWLNHLVDIG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH VLSETKRGRQRIFINDAALRVLTRE HHHHHHCCCEEEEEEHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]