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The map label for this gene is 38232920

Identifier: 38232920

GI number: 38232920

Start: 268821

End: 269168

Strand: Direct

Name: 38232920

Synonym: DIP0299

Alternate gene names: NA

Gene position: 268821-269168 (Clockwise)

Preceding gene: 38232918

Following gene: 38232921

Centisome position: 10.8

GC content: 54.6

Gene sequence:

>348_bases
ATGACAGCTTCGTTGATGAACACAGGCAAGAAAAACCCCTTTCGAGATACTCAGCAGGGGGAGTATGGGAACGGAGATCG
AAACGACTGGGTAATGCAAGCAAGCTGTCGCAACGGCGATCCTGATGCCCTCTTTGTGCGTGGTGCGGAGCAGCGTCGTG
CAGCAGCAATTTGCCGCCAATGCCCTGTGATGATTCAGTGCCGTGCCGATGCCCTAGATAATAAGGTCGAATTTGGTGTG
TGGGGCGGCCTCACCGAACGTCAGCGTCGTGCCATTTTGCGCAAGAATCCTCATGTAGATAGCTGGGAGCAGTTCTTCGC
CCAAGGTGGCGAACTTCTCGGCATGTAG

Upstream 100 bases:

>100_bases
ACTAACAGCTGTAGTTATTGTGCACGTTGTAAGACGATGCAGAAAGCCACGCTGATGTGGCTCTCATTTGGTTCCCGATT
AATGTCAGGAGGAGTTCATC

Downstream 100 bases:

>100_bases
GGCGTGTGTGCGCTCACAAGATTTCGGTACAGTGGCATGCATGACTAAATGGGAATACTCGACCGTGCCACTGTTAACGC
ACGCAACCAAGCAGATTCTG

Product: putative regulatory protein

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator WhiB; WhiB Family Regulatory Protein; Transcriptional Regulatory; WhiB-Related Protein; WhiB Protein; WhiB Transcriptional Regulator

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTASLMNTGKKNPFRDTQQGEYGNGDRNDWVMQASCRNGDPDALFVRGAEQRRAAAICRQCPVMIQCRADALDNKVEFGV
WGGLTERQRRAILRKNPHVDSWEQFFAQGGELLGM

Sequences:

>Translated_115_residues
MTASLMNTGKKNPFRDTQQGEYGNGDRNDWVMQASCRNGDPDALFVRGAEQRRAAAICRQCPVMIQCRADALDNKVEFGV
WGGLTERQRRAILRKNPHVDSWEQFFAQGGELLGM
>Mature_114_residues
TASLMNTGKKNPFRDTQQGEYGNGDRNDWVMQASCRNGDPDALFVRGAEQRRAAAICRQCPVMIQCRADALDNKVEFGVW
GGLTERQRRAILRKNPHVDSWEQFFAQGGELLGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12963; Mature: 12832

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLMNTGKKNPFRDTQQGEYGNGDRNDWVMQASCRNGDPDALFVRGAEQRRAAAICRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHH
CPVMIQCRADALDNKVEFGVWGGLTERQRRAILRKNPHVDSWEQFFAQGGELLGM
CCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TASLMNTGKKNPFRDTQQGEYGNGDRNDWVMQASCRNGDPDALFVRGAEQRRAAAICRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHH
CPVMIQCRADALDNKVEFGVWGGLTERQRRAILRKNPHVDSWEQFFAQGGELLGM
CCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA