| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is glpT [H]
Identifier: 38232906
GI number: 38232906
Start: 252957
End: 254327
Strand: Reverse
Name: glpT [H]
Synonym: DIP0285
Alternate gene names: 38232906
Gene position: 254327-252957 (Counterclockwise)
Preceding gene: 38232907
Following gene: 38232905
Centisome position: 10.22
GC content: 51.13
Gene sequence:
>1371_bases ATGTTTGCTTGGTTGCAAGCCCCCGGCCCTGCTGCCCCGCTGTCGGCGGAGCAGGTGGATCGCACCTACCCACGGATGCG TCTGCAGGTGTTCATGGGTATTTTCTTGGGCTATGCGGGTTTTTATTTGATCCGTAATAATATTTCGGCGATTGCCCCGT TGCTTATTGATGAAAGTGGTGCGATTGATAAGCCGGCGATCGGCATTATTGGTAATGCTGTGTTGGTCAGCTATGGCCTG TCTAAGTTCTTTAGTGCCATGGTGTCGGATCGTTCTAATGCTCGCTATTTCTTGCCGCTGGGCTTGGCACTGTCGGCGCT GATGAACTTGGTAGTTGCGTTTGTGCCGTGGGTTTCGGCCAGCGTGGGCGTGTTCGCTACGGTGATGTTCCTTAATGGTT GGTTCCAAGGCATGGGTTACCCTCCTTGTGGCCGTATTGTGGTGCAGTGGTTCTCTACTAGTGAGCGCGGTTGGAAGGGT TCGTTGTGGAACACTTCTCACAACTTGGGTGCTTTTGGTTTGCCAGTGTTGGTCGGTATTGGTTTGAGCATGACGGGCGA GAATTGGCGTGCTGCTTACTGGCTTCCTGCGTTGGTTGCTTTGGTTGTCGCGTTGGTTGCGTTCTTGCTTATTCGTGATA ATCCTCAGTCTGTTGGTTTGCCGCCTATCGACGACTACCGCAACGATCCTGCGAAGGTTGCGGAGGATACGGGCGAGAAG ATTTCGACGAAGGATTTGGTGTTCAAGCATATTTTGCACAGCCGCATCATTATGCTGTTGGCCATTGCGAATGTGTTTGT TTATGCCTTGCGTTATGGTGTTTTGCACTGGATTACCACGTACTTGTCTGAGCAGCACCACATGAGCATTGGTAGCGGTC TGATTGGTTTTGCTGCTTTCGAGTTGGCTGGCTTTATTGGCACGGTTTTGTGCGGTTGGTTGTCGGACAATGTGTTTAAG GGCAATCGTTCTGCTGCTATTTCGTTGTTCACCTTGGGCGCTGGTTTGTCTATCGCTGCATACTGGTTGGCTCCTGTGGG TACGCCGTTCTGGTTGATGGTTATTTTCGTTGCCTTTATTGGTGGTTTTATCTACGGTCCTGTTGGCTTGATCGGTTTGC AGGCATTGGATCTTTCACCTCGTAACGTGGCTGGTACCGCTGCTGGCTTCACGGGCTTGTTCGGTTACCTGCTGGGTGCA ACCTTGGCTTCGACTGGTGTGGGCTTCTTGGTTAAGTTCGCTGGTTGGAATGTCACGTTCATTGTGTTCTTGGTCTTTAC GGTTTTGATTCTGGTTATTTTCCAGGTGATCTGGCGCGAGGAGAAGAAGTTGATGCAGGAGCGTGCTTTGAAGCTCGAGC AGGGTGTTTAG
Upstream 100 bases:
>100_bases CTGTTACCAATTGTTACCGCTATGGTCACTATGGTTACCGAGCGCGGAGCACAATCGCAATTAGTTGATAAAAGTGATTG TGCACAAAGGAGTGCCTCGT
Downstream 100 bases:
>100_bases TTCCTGACTAGGAGAAGCGCTGGGGAGGAATTCCCCAGCGCTTTTGTTATCGTTGAGCGTGGACGCGAAGGAGAACCATA GTGTTATCAAAATGGTTACG
Product: putative glycerol-3-phosphate transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: G-3-P transporter; G-3-P permease [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MFAWLQAPGPAAPLSAEQVDRTYPRMRLQVFMGIFLGYAGFYLIRNNISAIAPLLIDESGAIDKPAIGIIGNAVLVSYGL SKFFSAMVSDRSNARYFLPLGLALSALMNLVVAFVPWVSASVGVFATVMFLNGWFQGMGYPPCGRIVVQWFSTSERGWKG SLWNTSHNLGAFGLPVLVGIGLSMTGENWRAAYWLPALVALVVALVAFLLIRDNPQSVGLPPIDDYRNDPAKVAEDTGEK ISTKDLVFKHILHSRIIMLLAIANVFVYALRYGVLHWITTYLSEQHHMSIGSGLIGFAAFELAGFIGTVLCGWLSDNVFK GNRSAAISLFTLGAGLSIAAYWLAPVGTPFWLMVIFVAFIGGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLGA TLASTGVGFLVKFAGWNVTFIVFLVFTVLILVIFQVIWREEKKLMQERALKLEQGV
Sequences:
>Translated_456_residues MFAWLQAPGPAAPLSAEQVDRTYPRMRLQVFMGIFLGYAGFYLIRNNISAIAPLLIDESGAIDKPAIGIIGNAVLVSYGL SKFFSAMVSDRSNARYFLPLGLALSALMNLVVAFVPWVSASVGVFATVMFLNGWFQGMGYPPCGRIVVQWFSTSERGWKG SLWNTSHNLGAFGLPVLVGIGLSMTGENWRAAYWLPALVALVVALVAFLLIRDNPQSVGLPPIDDYRNDPAKVAEDTGEK ISTKDLVFKHILHSRIIMLLAIANVFVYALRYGVLHWITTYLSEQHHMSIGSGLIGFAAFELAGFIGTVLCGWLSDNVFK GNRSAAISLFTLGAGLSIAAYWLAPVGTPFWLMVIFVAFIGGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLGA TLASTGVGFLVKFAGWNVTFIVFLVFTVLILVIFQVIWREEKKLMQERALKLEQGV >Mature_456_residues MFAWLQAPGPAAPLSAEQVDRTYPRMRLQVFMGIFLGYAGFYLIRNNISAIAPLLIDESGAIDKPAIGIIGNAVLVSYGL SKFFSAMVSDRSNARYFLPLGLALSALMNLVVAFVPWVSASVGVFATVMFLNGWFQGMGYPPCGRIVVQWFSTSERGWKG SLWNTSHNLGAFGLPVLVGIGLSMTGENWRAAYWLPALVALVVALVAFLLIRDNPQSVGLPPIDDYRNDPAKVAEDTGEK ISTKDLVFKHILHSRIIMLLAIANVFVYALRYGVLHWITTYLSEQHHMSIGSGLIGFAAFELAGFIGTVLCGWLSDNVFK GNRSAAISLFTLGAGLSIAAYWLAPVGTPFWLMVIFVAFIGGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLGA TLASTGVGFLVKFAGWNVTFIVFLVFTVLILVIFQVIWREEKKLMQERALKLEQGV
Specific function: Responsible for glycerol-3-phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=412, Percent_Identity=29.8543689320388, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI4503847, Length=412, Percent_Identity=29.8543689320388, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI256219483, Length=412, Percent_Identity=29.8543689320388, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI256219543, Length=433, Percent_Identity=28.6374133949192, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI256219564, Length=342, Percent_Identity=29.2397660818713, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI223717983, Length=412, Percent_Identity=22.3300970873786, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI38093649, Length=483, Percent_Identity=21.5320910973085, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1788573, Length=447, Percent_Identity=44.2953020134228, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI87082310, Length=424, Percent_Identity=35.1415094339623, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI2367259, Length=466, Percent_Identity=27.0386266094421, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1789152, Length=309, Percent_Identity=25.2427184466019, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17542316, Length=456, Percent_Identity=24.1228070175439, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI133901856, Length=473, Percent_Identity=21.5644820295983, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI133901854, Length=473, Percent_Identity=21.5644820295983, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24656866, Length=498, Percent_Identity=21.8875502008032, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI45550478, Length=498, Percent_Identity=21.8875502008032, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24656861, Length=498, Percent_Identity=21.8875502008032, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005267 - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49541; Mature: 49541
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAWLQAPGPAAPLSAEQVDRTYPRMRLQVFMGIFLGYAGFYLIRNNISAIAPLLIDESG CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC AIDKPAIGIIGNAVLVSYGLSKFFSAMVSDRSNARYFLPLGLALSALMNLVVAFVPWVSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH SVGVFATVMFLNGWFQGMGYPPCGRIVVQWFSTSERGWKGSLWNTSHNLGAFGLPVLVGI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC GLSMTGENWRAAYWLPALVALVVALVAFLLIRDNPQSVGLPPIDDYRNDPAKVAEDTGEK CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHCCCC ISTKDLVFKHILHSRIIMLLAIANVFVYALRYGVLHWITTYLSEQHHMSIGSGLIGFAAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH ELAGFIGTVLCGWLSDNVFKGNRSAAISLFTLGAGLSIAAYWLAPVGTPFWLMVIFVAFI HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH GGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLGATLASTGVGFLVKFAGWNVTF HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH IVFLVFTVLILVIFQVIWREEKKLMQERALKLEQGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFAWLQAPGPAAPLSAEQVDRTYPRMRLQVFMGIFLGYAGFYLIRNNISAIAPLLIDESG CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC AIDKPAIGIIGNAVLVSYGLSKFFSAMVSDRSNARYFLPLGLALSALMNLVVAFVPWVSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH SVGVFATVMFLNGWFQGMGYPPCGRIVVQWFSTSERGWKGSLWNTSHNLGAFGLPVLVGI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC GLSMTGENWRAAYWLPALVALVVALVAFLLIRDNPQSVGLPPIDDYRNDPAKVAEDTGEK CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHCCCC ISTKDLVFKHILHSRIIMLLAIANVFVYALRYGVLHWITTYLSEQHHMSIGSGLIGFAAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH ELAGFIGTVLCGWLSDNVFKGNRSAAISLFTLGAGLSIAAYWLAPVGTPFWLMVIFVAFI HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH GGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLGATLASTGVGFLVKFAGWNVTF HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH IVFLVFTVLILVIFQVIWREEKKLMQERALKLEQGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3329281; 9205837; 9278503; 3141744; 12893936 [H]