| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232897
Identifier: 38232897
GI number: 38232897
Start: 239862
End: 240698
Strand: Reverse
Name: 38232897
Synonym: DIP0276
Alternate gene names: NA
Gene position: 240698-239862 (Counterclockwise)
Preceding gene: 38232901
Following gene: 161598679
Centisome position: 9.67
GC content: 60.33
Gene sequence:
>837_bases ATGTACAGCAATTTCCTCGCCATGGCGTTCGCCCTCGCCTCGGCCCTCACCATCGCATGGGGCACCGTGGTCCGGCACCG CATAGCCGAGGAAACCGACGGCTCTCCCCTCCTCGAAGCGGTCACCCGTTTCCGCTGGTGGGTCGGTAGCCTCACCGCCC TGCTCGGCTACGCGCTCCAGGTGGTGGCTCTCGGTTTTGGCACCCTTTTGGTGGTTCAACCAATCCTTGTGCTGTCGCTT ATGTTCACGCTTCCGCTGTCCGCGCGTTACGACGGCCGCCGCCCCAGCCGCGACGAGATGGGCTGGGCGGGCGCGCTCAC GGTGGCCGTCGCCGTCCTCGTTGTGCTGGGCAAACCGGCCGCTGGTGATCCCCAGCCCCCTATGGATCGTTGGCTTATCT CCCTCGGGATCGGCGCTGTTATCTTGCTGACGCTGTGGTTTGTTTCCGGCAGCCTCGCTCTTAATACTCGCGCCCTGGTC CTAGGGGCTATCACTGGCGGCGTGTATGGCTACGTAGCTGTTCTTTCCAAGGCCACGGTGGACATCATGACTCACGGCGG TATCACCACTCTTGTGTTTTCTTGGCAGGGCTATTCCCTACTGTTTGGTGCGATTTTGGGCACTGTGATTCAGCAGTACG CGTTTAATGCTGGGCCGCTAAAAAATTCCCTGCCGGCGATGACCATTGTGGAGCCGATTGTGGCTTTTGCTTTGGGCTAT GCCGTGTTGGGTGAGCAGTTCCAAGTGTATGGCTTGAACTGGGCTTTTATGGCGGCCGCGTTGGTCACCATGGTGGTGTC TACTTTTGCGTTGTCGTGGCGCGGGGTGGGAAGCTAA
Upstream 100 bases:
>100_bases TACAGTCAATTTTGATCACTGCATATAATTCGGGGGTGAATAGTGCAGAGGGAGCGTCGTAAAGCAATGATGCTGCACAA ACCGTATAGGCTAAACCCCG
Downstream 100 bases:
>100_bases TTTAGATCGCCCAGGGGAATACCACGATCATGTAGGCCGAGATGGCAAGTCCTCCTAGCGACCACAGAATTACCGCAGGC CAGGTGCGGATAAATGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MYSNFLAMAFALASALTIAWGTVVRHRIAEETDGSPLLEAVTRFRWWVGSLTALLGYALQVVALGFGTLLVVQPILVLSL MFTLPLSARYDGRRPSRDEMGWAGALTVAVAVLVVLGKPAAGDPQPPMDRWLISLGIGAVILLTLWFVSGSLALNTRALV LGAITGGVYGYVAVLSKATVDIMTHGGITTLVFSWQGYSLLFGAILGTVIQQYAFNAGPLKNSLPAMTIVEPIVAFALGY AVLGEQFQVYGLNWAFMAAALVTMVVSTFALSWRGVGS
Sequences:
>Translated_278_residues MYSNFLAMAFALASALTIAWGTVVRHRIAEETDGSPLLEAVTRFRWWVGSLTALLGYALQVVALGFGTLLVVQPILVLSL MFTLPLSARYDGRRPSRDEMGWAGALTVAVAVLVVLGKPAAGDPQPPMDRWLISLGIGAVILLTLWFVSGSLALNTRALV LGAITGGVYGYVAVLSKATVDIMTHGGITTLVFSWQGYSLLFGAILGTVIQQYAFNAGPLKNSLPAMTIVEPIVAFALGY AVLGEQFQVYGLNWAFMAAALVTMVVSTFALSWRGVGS >Mature_278_residues MYSNFLAMAFALASALTIAWGTVVRHRIAEETDGSPLLEAVTRFRWWVGSLTALLGYALQVVALGFGTLLVVQPILVLSL MFTLPLSARYDGRRPSRDEMGWAGALTVAVAVLVVLGKPAAGDPQPPMDRWLISLGIGAVILLTLWFVSGSLALNTRALV LGAITGGVYGYVAVLSKATVDIMTHGGITTLVFSWQGYSLLFGAILGTVIQQYAFNAGPLKNSLPAMTIVEPIVAFALGY AVLGEQFQVYGLNWAFMAAALVTMVVSTFALSWRGVGS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008521 [H]
Pfam domain/function: PF05653 DUF803 [H]
EC number: NA
Molecular weight: Translated: 29561; Mature: 29561
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNFLAMAFALASALTIAWGTVVRHRIAEETDGSPLLEAVTRFRWWVGSLTALLGYALQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVALGFGTLLVVQPILVLSLMFTLPLSARYDGRRPSRDEMGWAGALTVAVAVLVVLGKPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCC AGDPQPPMDRWLISLGIGAVILLTLWFVSGSLALNTRALVLGAITGGVYGYVAVLSKATV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH DIMTHGGITTLVFSWQGYSLLFGAILGTVIQQYAFNAGPLKNSLPAMTIVEPIVAFALGY HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH AVLGEQFQVYGLNWAFMAAALVTMVVSTFALSWRGVGS HHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYSNFLAMAFALASALTIAWGTVVRHRIAEETDGSPLLEAVTRFRWWVGSLTALLGYALQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVALGFGTLLVVQPILVLSLMFTLPLSARYDGRRPSRDEMGWAGALTVAVAVLVVLGKPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCC AGDPQPPMDRWLISLGIGAVILLTLWFVSGSLALNTRALVLGAITGGVYGYVAVLSKATV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH DIMTHGGITTLVFSWQGYSLLFGAILGTVIQQYAFNAGPLKNSLPAMTIVEPIVAFALGY HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH AVLGEQFQVYGLNWAFMAAALVTMVVSTFALSWRGVGS HHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8117072; 12948626 [H]