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The map label for this gene is deoD [H]

Identifier: 38232892

GI number: 38232892

Start: 234348

End: 235064

Strand: Direct

Name: deoD [H]

Synonym: DIP0271

Alternate gene names: 38232892

Gene position: 234348-235064 (Clockwise)

Preceding gene: 38232891

Following gene: 38232893

Centisome position: 9.42

GC content: 54.39

Gene sequence:

>717_bases
ATGGCTGAAAAGTCAACCCCACACATCAATCCCAAGGGCGTCGATATCGCAGAAACTGTTCTGCTGCCTGGCGACCCACT
GCGTGCAAAGTTTATCGCAGACACCTACCTAGAAGACGTTGTGCAGTTCAATTCGGTGCGCAACATGCTCGGCTTCACCG
GTACCTACCAAGGAACCCCAGTTTCTGTGATGGGTTCCGGCATGGGTATGCCTTCTATCGGCATCTACTCCTACGAGCTC
ATTAACTTCTTTGATGCCCGCAACGTCATTCGCGTGGGCTCCATCGGCGCTATGCAGAAAGATATTGACCTCTACGAGAT
CATCGTTGCAGCATCTGCATCCACCGACTCCAACTTCCTTGAGCAGTACAACTTGCCTGGCACCTACGCCCCAACTGCAT
CGTGGACCCTGCTGAGGGCGTTCATGGATGAGGCAGACCGCAAGGGTAAGAAGGTTCACGTCGGCAACATTTTGTCCTCC
GATGTTTTCTACAACGCTGATAATACCGTGAATGAGCGTTGGGCTCGCATGGGTGTGCTCGGTGTAGAGATGGAATCGGC
AGCACTGTACTCCATCGCCGCATACGCTGGCGCAAATGCTCTGGGCGTATTTACCGTGTCGGACAACCTGTTCACCGGAG
CACGCACCACGGCTGAAGAGCGCGAAAGCGCCTTCACCGACATGATGGAACTCGCACTACCATTGGCACGCGCATGA

Upstream 100 bases:

>100_bases
ATAGGCCATAGAACAAATGTAAAAGTGGCCGTTGACATTTGTAACTACTCGGGCTTAACCTCACAGTATCAGATAATTCA
CGAGCGAGGAGATGTACGTT

Downstream 100 bases:

>100_bases
CAACGCACAACGCAACCTTGAAGCCTACTGATCCGAAGGCAGCAGTGCCGGTCCTGCTGTTCAGCTTCGTTTTCTGTTTG
ATTGTGGACAATGGTTTTAA

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNSVRNMLGFTGTYQGTPVSVMGSGMGMPSIGIYSYEL
INFFDARNVIRVGSIGAMQKDIDLYEIIVAASASTDSNFLEQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSS
DVFYNADNTVNERWARMGVLGVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERESAFTDMMELALPLARA

Sequences:

>Translated_238_residues
MAEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNSVRNMLGFTGTYQGTPVSVMGSGMGMPSIGIYSYEL
INFFDARNVIRVGSIGAMQKDIDLYEIIVAASASTDSNFLEQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSS
DVFYNADNTVNERWARMGVLGVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERESAFTDMMELALPLARA
>Mature_237_residues
AEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNSVRNMLGFTGTYQGTPVSVMGSGMGMPSIGIYSYELI
NFFDARNVIRVGSIGAMQKDIDLYEIIVAASASTDSNFLEQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSSD
VFYNADNTVNERWARMGVLGVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERESAFTDMMELALPLARA

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=229, Percent_Identity=46.2882096069869, Blast_Score=215, Evalue=2e-57,
Organism=Escherichia coli, GI1790265, Length=195, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25841; Mature: 25709

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNSVRNMLGFTGTYQGTP
CCCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VSVMGSGMGMPSIGIYSYELINFFDARNVIRVGSIGAMQKDIDLYEIIVAASASTDSNFL
CEEEECCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHCCHHEEEEEEECCCCCHHHH
EQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSSDVFYNADNTVNERWARMGVL
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCEECCCEEECCCCCHHHHHHHHCEE
GVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERESAFTDMMELALPLARA
EEEHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNSVRNMLGFTGTYQGTP
CCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VSVMGSGMGMPSIGIYSYELINFFDARNVIRVGSIGAMQKDIDLYEIIVAASASTDSNFL
CEEEECCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHCCHHEEEEEEECCCCCHHHH
EQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSSDVFYNADNTVNERWARMGVL
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCEECCCEEECCCCCHHHHHHHHCEE
GVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERESAFTDMMELALPLARA
EEEHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA