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The map label for this gene is 38232887

Identifier: 38232887

GI number: 38232887

Start: 226618

End: 227739

Strand: Reverse

Name: 38232887

Synonym: DIP0264

Alternate gene names: NA

Gene position: 227739-226618 (Counterclockwise)

Preceding gene: 38232888

Following gene: 38232886

Centisome position: 9.15

GC content: 58.2

Gene sequence:

>1122_bases
TTGAATGTTTCCCTGCCCACAAGACCGCCAGCTAGACTGTTCCCCATGACTAATAAGGACCAAGAAGAGCGCGATAAGGC
GCGGGCACAGCGCGCCGCCGAGCAGGCAGCGGCTCGAAAAGCAGAGATCGAAAAGGCTCCTTATGTGGCATTATCGGTGC
AGGCTTCCGGTATTCACCCATCGACGAGCCGCCTCGTTACCATTGATGCCGTTACTTTCACAGAGCAGGGCGAGGAAGTC
GACCACTTCTTCGCAGTGCTCAACCCAGAATCAAACCCTGGCCCCTTCCACCTGCACGGCCTTTCGCCTGAGCAGATTCA
AGAGGGTAAGCGCTATTCGCAGATTCTTAAGGCTCTTGACAGGCTTATCGATGGCCGCACCTTGCTGGTACACAATGCAG
AGCTGGTGTGGGGGTTCATTGTTTCTGAGTCGAAACGCGCAATGAGCAATGCTGCCCGCGCTAACCGCAGTCGCAGTCGG
CAACGCAATCGGCGCAGGCAGCGGGTGGGGCACATCCCCAAGCCAGTCACGATTGTGGATACGCTCGCTACTGCACGCCG
CCTAGGATTAACGTTTGCAGACATCCGCATTAGGAACGTCGCAACGCAACTGGGCCTAGAAGCACCTGATGCTCGTGCGA
GTGTGGCGCGCGCGCAGGCGGACACCGCACAGCTCACACGGGAAGACACACTGTTGGTGGCGCGGATGTTCTTTGTGGAA
CACGCCCAAGGGGCTGTGTCGTCGACAAGCCCGGCGGACCTGCGCGCGGACCGCTTTGGTCTGCAACGATCCAACGTCCG
CGTGGATGCAATGGAGGTGCCGCGCGTGTGGGAAAACCCTGGCGTCTACACCAAAGAGCGCGGGCTGGTGCAGGGCATGG
AAGTTGTGGTGGCACCTGAGATCACTATGGATCCCGACCGGATCATTCAGGCGATCGTGCGCACAGAGCTGGCCTACAAT
GAGAAAATTACCCGCGCCTCCAGTTTGGTTGTGTGCAATAAACGTGAAGATCTTACCGGCAAGGCAATGCACGGCGATCG
CAAAGGGATTCCGCTGATGACGGACGAAGAATTTCTGCGTGCGGTTGAACACGTCAAGCCGGGCAAGCCAGCAGAGACCT
AA

Upstream 100 bases:

>100_bases
CCGTCAGGTGCTCGCAAAAAATCCTGCTGCCGGAGCCGACTCCGATAAACGCAATCACACCTTCGCGATCGCCCGCGACC
AAGGGTTTAACCTCTAGGAT

Downstream 100 bases:

>100_bases
GTGGACTAGACTTAGGCGCCATGAGTTTTAATTTGCGCACTCGCCTTGCAATCGGCGCGGCCGCTGTGGCCACTACGGCT
TCGCGGGCGACCGGCCGTGG

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: DNA Polymerase III Epsilon Subunit; DNA Polymerase III; LOW QUALITY PROTEIN DNA Polymerase III Subunit Epsilon; DNA Polymerase III DnaQ; DNA Polymerase III Subunit Epsilon-Like 3-5' Exonuclease

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEKAPYVALSVQASGIHPSTSRLVTIDAVTFTEQGEEV
DHFFAVLNPESNPGPFHLHGLSPEQIQEGKRYSQILKALDRLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSR
QRNRRRQRVGHIPKPVTIVDTLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADTAQLTREDTLLVARMFFVE
HAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPGVYTKERGLVQGMEVVVAPEITMDPDRIIQAIVRTELAYN
EKITRASSLVVCNKREDLTGKAMHGDRKGIPLMTDEEFLRAVEHVKPGKPAET

Sequences:

>Translated_373_residues
MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEKAPYVALSVQASGIHPSTSRLVTIDAVTFTEQGEEV
DHFFAVLNPESNPGPFHLHGLSPEQIQEGKRYSQILKALDRLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSR
QRNRRRQRVGHIPKPVTIVDTLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADTAQLTREDTLLVARMFFVE
HAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPGVYTKERGLVQGMEVVVAPEITMDPDRIIQAIVRTELAYN
EKITRASSLVVCNKREDLTGKAMHGDRKGIPLMTDEEFLRAVEHVKPGKPAET
>Mature_373_residues
MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEKAPYVALSVQASGIHPSTSRLVTIDAVTFTEQGEEV
DHFFAVLNPESNPGPFHLHGLSPEQIQEGKRYSQILKALDRLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSR
QRNRRRQRVGHIPKPVTIVDTLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADTAQLTREDTLLVARMFFVE
HAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPGVYTKERGLVQGMEVVVAPEITMDPDRIIQAIVRTELAYN
EKITRASSLVVCNKREDLTGKAMHGDRKGIPLMTDEEFLRAVEHVKPGKPAET

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41510; Mature: 41510

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEKAPYVALSVQASGIHP
CCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
STSRLVTIDAVTFTEQGEEVDHFFAVLNPESNPGPFHLHGLSPEQIQEGKRYSQILKALD
CCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHH
RLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSRQRNRRRQRVGHIPKPVTIVD
HHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
TLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADTAQLTREDTLLVARMFFVE
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPGVYTKERGLVQGMEVVVAPE
HHCCCCCCCCCCHHHHHHHCCCCCCEEEEHEECCCHHCCCCCEECCCCHHCCCEEEEECC
ITMDPDRIIQAIVRTELAYNEKITRASSLVVCNKREDLTGKAMHGDRKGIPLMTDEEFLR
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
AVEHVKPGKPAET
HHHHCCCCCCCCC
>Mature Secondary Structure
MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEKAPYVALSVQASGIHP
CCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
STSRLVTIDAVTFTEQGEEVDHFFAVLNPESNPGPFHLHGLSPEQIQEGKRYSQILKALD
CCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHH
RLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSRQRNRRRQRVGHIPKPVTIVD
HHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
TLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADTAQLTREDTLLVARMFFVE
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPGVYTKERGLVQGMEVVVAPE
HHCCCCCCCCCCHHHHHHHCCCCCCEEEEHEECCCHHCCCCCEECCCCHHCCCEEEEECC
ITMDPDRIIQAIVRTELAYNEKITRASSLVVCNKREDLTGKAMHGDRKGIPLMTDEEFLR
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
AVEHVKPGKPAET
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA