Click here to switch to the map view.

The map label for this gene is 38232857

Identifier: 38232857

GI number: 38232857

Start: 197338

End: 198327

Strand: Reverse

Name: 38232857

Synonym: DIP0233

Alternate gene names: NA

Gene position: 198327-197338 (Counterclockwise)

Preceding gene: 38232863

Following gene: 38232856

Centisome position: 7.97

GC content: 64.75

Gene sequence:

>990_bases
ATGACAGACCAACCCCCAACGCCGAACACGGCGGACGCAACCCCGCCCCGCCAAGACAAGAAGCTGAACACCAACGCGAT
CATTGCCGTCGTCCTCATCCTCGCCGGCCTGGGCGTACTGCTATACCCAGTGCTCGCCACCCAGTGGAATAACTACCAGC
AGTCCCGCGCCGCCGAGGCCTACTCGCAGCTGGAAAAGGGCGTGCCCCCAGAGGTCCTCAATAAGGCCTGGGAGGAGGCG
CAGCAATACAACGCCAATCTCGGGGATATCGACCCCGGCGATGCGTGGACCAGCTCCGACGACGAGAGCTCCTCGGCGTA
TCAGCGCTACCTGAATTACCTCTCCGCCCTGAACGAGACTGAGGCCATGGGCCGCATTGTGCTGCCCTCCATCAAATCCG
ATCTGCCAATCTTCCACGGCACCTCCGACCGCGTGCTGGCCCGCGGGGTCGGCCACCTTTACGGCACGGACCTGCCTGTT
GGCGCACCCGGCGAGCTCGGCGAGGATGGCGTTATCCCGCCCGCCCCACCAGAGGGCCGACTCTCCGCGCTTTCTGCCCA
TACCGGCCTGCAGAACGCCACCCTGTGGGACAACCTCATCCAGATCAAGAAGGGCGACCCGGTCTACGTCGCCGCGGCGG
GCGAGAAGCTTAAGTACGAGGTCCGGAACATCGAGGTCGTCACCCCGGATAAGACCAGCCTGCTGCGCCGCACGTCGAAT
AAGGACCAGGTCACGCTCATCACCTGCACCCCCTATGGCATCAACACCCACCGGCTGATCATCACCGCCGAGCGCGTGCC
GATGGATCCGCAGGGAGAGTCCGCCTTCGACGGGCAGGGCACTACCTGGCAGTGGTGGATGTGGGCCATCCTCGCTGCCG
CGGCGATCATCGTGCTGCTGCTGATCCGCTGGTGGTGGAAGAACTTCCGCAAGCAGGAAGGCGAGGAGGGCCCCACAACC
TCCGGCGCTGGGGGCACCACGGAGAGTTAA

Upstream 100 bases:

>100_bases
GCAAAAATTAAGCCTTTTGTAACCTCGCAGTGAAGAATAGACTCCAACTCTCCACATTCCACCGGAGCGAGCCCCAACCC
CTCAGTAGAAGTTAAGGCCT

Downstream 100 bases:

>100_bases
CGGGCTTTTGCCTGGTGCGTTGATTAACATCATGAGCTCATCCTCCTCTCAGGCTTCTACTACCCGCCGCCTCACCGCCA
CCGCCGCAGTCACCCTGGCC

Product: putative fimbrial associated sortase-like protein

Products: NA

Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase-Like Protein; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Sortase C Type; Sortase C; SortaseC; Fimbrial Associated Sortase Family Protein

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEA
QQYNANLGDIDPGDAWTSSDDESSSAYQRYLNYLSALNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPV
GAPGELGEDGVIPPAPPEGRLSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVRNIEVVTPDKTSLLRRTSN
KDQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGTTWQWWMWAILAAAAIIVLLLIRWWWKNFRKQEGEEGPTT
SGAGGTTES

Sequences:

>Translated_329_residues
MTDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEA
QQYNANLGDIDPGDAWTSSDDESSSAYQRYLNYLSALNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPV
GAPGELGEDGVIPPAPPEGRLSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVRNIEVVTPDKTSLLRRTSN
KDQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGTTWQWWMWAILAAAAIIVLLLIRWWWKNFRKQEGEEGPTT
SGAGGTTES
>Mature_328_residues
TDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEAQ
QYNANLGDIDPGDAWTSSDDESSSAYQRYLNYLSALNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPVG
APGELGEDGVIPPAPPEGRLSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVRNIEVVTPDKTSLLRRTSNK
DQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGTTWQWWMWAILAAAAIIVLLLIRWWWKNFRKQEGEEGPTTS
GAGGTTES

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35946; Mature: 35815

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YSQLEKGVPPEVLNKAWEEAQQYNANLGDIDPGDAWTSSDDESSSAYQRYLNYLSALNET
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPVGAPGELGEDGVIPPAPPEGR
HHHCEEECCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
LSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVRNIEVVTPDKTSLLRRTSN
HHHHHHHCCCCCCHHHHHHHEEECCCCEEEEECCCCEEEEEEEEEEECCCHHHHHHHCCC
KDQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGTTWQWWMWAILAAAAIIVLL
CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIRWWWKNFRKQEGEEGPTTSGAGGTTES
HHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YSQLEKGVPPEVLNKAWEEAQQYNANLGDIDPGDAWTSSDDESSSAYQRYLNYLSALNET
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPVGAPGELGEDGVIPPAPPEGR
HHHCEEECCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
LSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVRNIEVVTPDKTSLLRRTSN
HHHHHHHCCCCCCHHHHHHHEEECCCCEEEEECCCCEEEEEEEEEEECCCHHHHHHHCCC
KDQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGTTWQWWMWAILAAAAIIVLL
CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIRWWWKNFRKQEGEEGPTTSGAGGTTES
HHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA