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The map label for this gene is yjeA [H]

Identifier: 38232851

GI number: 38232851

Start: 191220

End: 192626

Strand: Direct

Name: yjeA [H]

Synonym: DIP0225

Alternate gene names: 38232851

Gene position: 191220-192626 (Clockwise)

Preceding gene: 38232850

Following gene: 38232853

Centisome position: 7.68

GC content: 57.64

Gene sequence:

>1407_bases
ATGAACAGCGTTCACTTCCGCCGCCACACAAGCCGCACCCGCCGTATCAGTATTTTTCTTGCTGCGTGCCTACTCGCCAC
GGGATGCATCACGGGATGCACCATCAGCACGCCGAACACTCCGGTTTCGGAAAGCGACTCCAGCACTTCTAGTTCGCAGA
GCTCCCAAGATGTTGAGCTGACGGTGGATGCTGCGTCGGGAATGGTGTCTACGAATAGTCCGCAGTTGCCTATTCACGTG
CAGTGGCCGGTGTTGGAGGGACATGAGAAGCTCTCGGAGGCAATTGCGGTGTGGGCTGAGGGGGAGGCTCGCGAGTTTAT
TGGGGAGTATGGGCCACGTGAGGTGAATCCTTCGGAGTTGAATGGTTCGGGGGAGCAGGTGCGTGATGGTGATGTGGTTG
CGATGCGGTTGACTCTTGAGGAGTTTGGTGGGGCTAATGCGGCGTCGATGAGTCGTATGTTTTTTAGTTCGGGGGATCGG
GTTTGGCAGGGCCCTGATGTGATTGCGCAGGATAGGCGTGTCGACGCCGCCCGCGCGGTTCTTGATCAGTTGGGTGACCG
GGTGGCGTCTGGTGTGTCGGCGGATGAGGTTGCGGGGATTCCGAATTTGTTTGGGGATGTGTTGGTTGAGGGGGATGTGG
TGCATGTGCGGTTGCCGCAGGCGAGTGTGTTGGCGTCGTCGGAGGGGATTGTGGAGGTTGATATTCCTGCGGAGGGTCTG
TTGTCGCAGAACGGTAAGCGGTTATTGCCGCCGGCGCCGGTTCCGCCCCCAATGCCACAGTTGCCGCAAGTGCAATCTAG
AGGGGCAGAGCCAGTGGATTGTTCAGTTTTAAAATGTGTGGCGTTGACGTTTGATGATGGCCCTGGTCCTTATACGTCGC
AGATTTTGGATACGTTGGATTCGCATGGGGTAAAGGCGACGTTTTTTGAGATTGCGACGGCGATTCCGCGGTTCCCTGAG
GTGGTGCGTCGGCAGGTGGCGTCGGGGATGGAAGTCGGTAGCCATACGGTGACGCATCGTCAGTTGCCGTTGTTGCCGTT
GGCGGAGCAGCAGCAGGAGGCGGATGGTGCTAGTGATCGGTTGGCGGAGGCGGGTGCGCCGCGGCCGGTGATGATGCGTC
CGCCGTATGGTGCGTGGAATCAGGATACGAAGCGTTTGGGGTATTCGTTGATTTTGTGGAATGTGGATTCTGAGGATTGG
AAGAATCGGGATGCGCAGGTGACTACGAATAACATCATGGCTCAGGTGCGCCCGGGGTCGATTGTGTTGATGCATGATAT
TCATCCGTCGACGGCTGAGGCGTTGCCGGGGATTATTGACCGCTTAAAGGAGCAGGGTTACACGCTGGTGACGGTGTCGC
AGCTGTTGGGGCAGACTGTTCCTGGTGAGGTGTATTACGGTCGGTAA

Upstream 100 bases:

>100_bases
GAAATGGTTTAATTTGGCACGAACTACTCACTTGCCCTCAAAAGTGTCTCACCCGGAAGAATTCCTCGCTCAACTGGTGT
GGATGCGCTAAGTTTTCCTT

Downstream 100 bases:

>100_bases
TTTACTGCCCAGGCTAAGTGATGGAGGGCTTCTGTCAGGGTGGTATCGTCGTGGGATCCAAATCCTATGACGATACCGTT
GCTCAGGTCGGAATCGGGGT

Product: putative secreted polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSESDSSTSSSQSSQDVELTVDAASGMVSTNSPQLPIHV
QWPVLEGHEKLSEAIAVWAEGEAREFIGEYGPREVNPSELNGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDR
VWQGPDVIAQDRRVDAARAVLDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQASVLASSEGIVEVDIPAEGL
LSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVALTFDDGPGPYTSQILDTLDSHGVKATFFEIATAIPRFPE
VVRRQVASGMEVGSHTVTHRQLPLLPLAEQQQEADGASDRLAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSEDW
KNRDAQVTTNNIMAQVRPGSIVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQTVPGEVYYGR

Sequences:

>Translated_468_residues
MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSESDSSTSSSQSSQDVELTVDAASGMVSTNSPQLPIHV
QWPVLEGHEKLSEAIAVWAEGEAREFIGEYGPREVNPSELNGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDR
VWQGPDVIAQDRRVDAARAVLDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQASVLASSEGIVEVDIPAEGL
LSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVALTFDDGPGPYTSQILDTLDSHGVKATFFEIATAIPRFPE
VVRRQVASGMEVGSHTVTHRQLPLLPLAEQQQEADGASDRLAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSEDW
KNRDAQVTTNNIMAQVRPGSIVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQTVPGEVYYGR
>Mature_468_residues
MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSESDSSTSSSQSSQDVELTVDAASGMVSTNSPQLPIHV
QWPVLEGHEKLSEAIAVWAEGEAREFIGEYGPREVNPSELNGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDR
VWQGPDVIAQDRRVDAARAVLDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQASVLASSEGIVEVDIPAEGL
LSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVALTFDDGPGPYTSQILDTLDSHGVKATFFEIATAIPRFPE
VVRRQVASGMEVGSHTVTHRQLPLLPLAEQQQEADGASDRLAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSEDW
KNRDAQVTTNNIMAQVRPGSIVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQTVPGEVYYGR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=291, Percent_Identity=26.1168384879725, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323339, Length=211, Percent_Identity=28.9099526066351, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 50410; Mature: 50410

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSESDSSTSSSQSSQDVEL
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEE
TVDAASGMVSTNSPQLPIHVQWPVLEGHEKLSEAIAVWAEGEAREFIGEYGPREVNPSEL
EEECCCCEEECCCCCCEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCCHHHC
NGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDRVWQGPDVIAQDRRVDAARAV
CCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHCCCCCEECCCCCHHCCCCHHHHHHH
LDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQASVLASSEGIVEVDIPAEGL
HHHHHHHHHCCCCHHHHCCCHHHHHHHEECCCEEEEECCCHHHEECCCCEEEEECCCHHH
LSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVALTFDDGPGPYTSQILDTLD
HCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHEEEEEEEEECCCCCCHHHHHHHHHH
SHGVKATFFEIATAIPRFPEVVRRQVASGMEVGSHTVTHRQLPLLPLAEQQQEADGASDR
HCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCHHHH
LAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSEDWKNRDAQVTTNNIMAQVRPGS
HHHCCCCCCEEECCCCCCCCCHHHHCCEEEEEEECCCHHHCCCCCEEEECCEEEEECCCC
IVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQTVPGEVYYGR
EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCEECCC
>Mature Secondary Structure
MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSESDSSTSSSQSSQDVEL
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEE
TVDAASGMVSTNSPQLPIHVQWPVLEGHEKLSEAIAVWAEGEAREFIGEYGPREVNPSEL
EEECCCCEEECCCCCCEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCCHHHC
NGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDRVWQGPDVIAQDRRVDAARAV
CCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHCCCCCEECCCCCHHCCCCHHHHHHH
LDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQASVLASSEGIVEVDIPAEGL
HHHHHHHHHCCCCHHHHCCCHHHHHHHEECCCEEEEECCCHHHEECCCCEEEEECCCHHH
LSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVALTFDDGPGPYTSQILDTLD
HCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHEEEEEEEEECCCCCCHHHHHHHHHH
SHGVKATFFEIATAIPRFPEVVRRQVASGMEVGSHTVTHRQLPLLPLAEQQQEADGASDR
HCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCHHHH
LAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSEDWKNRDAQVTTNNIMAQVRPGS
HHHCCCCCCEEECCCCCCCCCHHHHCCEEEEEEECCCHHHCCCCCEEEECCEEEEECCCC
IVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQTVPGEVYYGR
EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]