Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

Click here to switch to the map view.

The map label for this gene is 38232842

Identifier: 38232842

GI number: 38232842

Start: 183877

End: 185304

Strand: Direct

Name: 38232842

Synonym: DIP0216

Alternate gene names: NA

Gene position: 183877-185304 (Clockwise)

Preceding gene: 38232841

Following gene: 38232843

Centisome position: 7.39

GC content: 55.25

Gene sequence:

>1428_bases
ATGCCAAAGCTAAAAGGCTCGCTAAAAAACATCACAGACAAACCAAGCACCATACGAGAAGTCCTACTCCGCGCCACACA
CACCCGCACCAACGGGAAAACCATCACCACCTCCGAACCCGTACGCGTAAAAGTCTCCGAATCAGGCGACTTCACAGAAA
CACTCGCGCCGGGAGCTGCGGTGCTAGTACTCGTCGGTGCGGATTTTATGGCCCGTGAGTCAATCCCCCTGCTGGTTGCT
GAGGGGATGACCACCATTGCGGAGGCGATGGAAGCAGCTAGGGATTTCACCCCTGATGTGCACGACCGCCTTGCGGAGCT
TGCGGCGGAAACGCAGAAGAATCTGGAGGAAGCCCGTGGTGTTAAAGCTGAGGCTGATAGCGCCACGGCCCGTATGCGTG
AGGCTGCGCAGGCTTTGAAAGATTCTGTGGATGGTTCGATTGCGGAGGCTACGGTGGGAATCAAGAAAAGTGGATCTGAG
CTTCTAGCTTCTATGCAGGCTTTGCAGTCTAAGGCTGCTTCTTCTGAATCTGAGGCTAAGGAGTCGGCGCAGGGGGCGGA
GGCTTCCCGTTCTGCGGCGTTAGCGTCTGCGTCGTCTGCGTCCTCGTCTGCTGGTGAGGCGGCGGAGTCGTTGGCGGGTT
TGCGTGCGAAGATTGAAGAGTGGAAGCCCCACGGGGAGCAGTTGGCTCAGTGGCAGCCGCAGTTTGAGTGGCTGAAAGAG
AACGCGGCGAGCGGGTTCACTAAGATCGCGGAGTTGATGCAGGATGCGGCGGCTGGTGTGCGTGGTGAGCTTTCGGGTTT
GGTGGAGCAAGCTAAAACGGCGCAAACCACAGCCGGGCAGCACTCGCTTAAGGCACAAGCCGCAGCAAAGGATGCAGAAT
CCGTGGCGAACCGCGTTGTGGATGCAGCGATTGCGAAGCTCAAAGGTAATGCTCCTGCCATGCTAGATACACTCGAAGAG
CTGGCAGAGCGAGTGATATCGGGTGGAACGTTAGAGACTGAGATTCTGCAGAAGCTGTCTAAAATGGCGGATTCTGACAC
CGTGAAAAAAATTGTCGCCCGCCTAGATGGTCTTACGATTGCGGGTGTACAGGGGCTTTCGGCAGCGCTTGCGGATAAGG
CGGCGGCACGTCATAAGCATGGCACCTCGGATATTAACGGTCTTGATACAGAACTCGCGGGGTTTAAAGGCGCTTTGGCT
GAAAAGGCCCCGCGCCAGCACGGGCATACTCTACAAGAGATTTCGGGGCTTTCAGGAGCTATTTTAAATGTGCGAAATGA
GCTTTCACAAAAAGCATCACAACAATACGTGAATAGTGTGGAGACTGAAGCTAAGCGCCAATACGGGCGAATTAAAGATA
TTTCGGTGGTCAATTCCCTTCCCGCTTCCCCTGATGCAGGCACGATCTATTTGGTAAAGGAGCGATAG

Upstream 100 bases:

>100_bases
GAGGATTCGAGTCTTTTAACCAGGTGTCGGTCACGGTGCATCCGATCGTGAATTTCGCAGCAATTTTGTCCGAAGAACGC
AGAAAGAGAGGCCTACAGTA

Downstream 100 bases:

>100_bases
TGATATTCTACGGCTCGTCCAAAATTAAAGAGGTATTCTACGGTGACACCCGCATTAAAGAGGTCTACGCTGGGGCGGAT
TTGGTGTGGAAGCGGATCAC

Product: putative phage tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MPKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKVSESGDFTETLAPGAAVLVLVGADFMARESIPLLVA
EGMTTIAEAMEAARDFTPDVHDRLAELAAETQKNLEEARGVKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSE
LLASMQALQSKAASSESEAKESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWKPHGEQLAQWQPQFEWLKE
NAASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQHSLKAQAAAKDAESVANRVVDAAIAKLKGNAPAMLDTLEE
LAERVISGGTLETEILQKLSKMADSDTVKKIVARLDGLTIAGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGALA
EKAPRQHGHTLQEISGLSGAILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVNSLPASPDAGTIYLVKER

Sequences:

>Translated_475_residues
MPKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKVSESGDFTETLAPGAAVLVLVGADFMARESIPLLVA
EGMTTIAEAMEAARDFTPDVHDRLAELAAETQKNLEEARGVKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSE
LLASMQALQSKAASSESEAKESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWKPHGEQLAQWQPQFEWLKE
NAASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQHSLKAQAAAKDAESVANRVVDAAIAKLKGNAPAMLDTLEE
LAERVISGGTLETEILQKLSKMADSDTVKKIVARLDGLTIAGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGALA
EKAPRQHGHTLQEISGLSGAILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVNSLPASPDAGTIYLVKER
>Mature_474_residues
PKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKVSESGDFTETLAPGAAVLVLVGADFMARESIPLLVAE
GMTTIAEAMEAARDFTPDVHDRLAELAAETQKNLEEARGVKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSEL
LASMQALQSKAASSESEAKESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWKPHGEQLAQWQPQFEWLKEN
AASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQHSLKAQAAAKDAESVANRVVDAAIAKLKGNAPAMLDTLEEL
AERVISGGTLETEILQKLSKMADSDTVKKIVARLDGLTIAGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGALAE
KAPRQHGHTLQEISGLSGAILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVNSLPASPDAGTIYLVKER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49807; Mature: 49676

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKVSESGDFTETLAPGAA
CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCHHHHCCCHH
VLVLVGADFMARESIPLLVAEGMTTIAEAMEAARDFTPDVHDRLAELAAETQKNLEEARG
HHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
VKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSELLASMQALQSKAASSESEAK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHCCHHHHHHHHHHHHHHHCCCHHHHH
ESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWKPHGEQLAQWQPQFEWLKE
HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH
NAASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQHSLKAQAAAKDAESVANRVV
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DAAIAKLKGNAPAMLDTLEELAERVISGGTLETEILQKLSKMADSDTVKKIVARLDGLTI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEE
AGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGALAEKAPRQHGHTLQEISGLSGA
ECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHCCCHHH
ILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVNSLPASPDAGTIYLVKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
PKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKVSESGDFTETLAPGAA
CCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCHHHHCCCHH
VLVLVGADFMARESIPLLVAEGMTTIAEAMEAARDFTPDVHDRLAELAAETQKNLEEARG
HHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
VKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSELLASMQALQSKAASSESEAK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHCCHHHHHHHHHHHHHHHCCCHHHHH
ESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWKPHGEQLAQWQPQFEWLKE
HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH
NAASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQHSLKAQAAAKDAESVANRVV
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DAAIAKLKGNAPAMLDTLEELAERVISGGTLETEILQKLSKMADSDTVKKIVARLDGLTI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEE
AGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGALAEKAPRQHGHTLQEISGLSGA
ECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHCCCHHH
ILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVNSLPASPDAGTIYLVKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA