Click here to switch to the map view.

The map label for this gene is 38232718

Identifier: 38232718

GI number: 38232718

Start: 72365

End: 72664

Strand: Reverse

Name: 38232718

Synonym: DIP0086

Alternate gene names: NA

Gene position: 72664-72365 (Counterclockwise)

Preceding gene: 38232719

Following gene: 38232717

Centisome position: 2.92

GC content: 49.33

Gene sequence:

>300_bases
TTGACAATTTATTATGTTTATACAACACTATATTGCATGTCCCCAAAGAAAAAGCTTGAACGGACTATCTACAACCGCAT
CCGCGTACTGCGCACCGAACGAGATATGTCTCGCGCACAACTCGCGGAGCTTGTAGACGTCAACCCACAAACCATTGGTG
CACTAGAACGAGGAGATCACTCCCCCAGCCTCGATCTTGCCCTTCGTATTTGCGACGTATTCAACCTACCTATCGAGGCG
ATATTCTCACGCATACCCTTCACCCCCCTCACCGCTGCAAGTCTCACTCAAGGAGCATGA

Upstream 100 bases:

>100_bases
GGAAAAATCACCATCCTTGATGATGCCTCAGGCATCTGGGTAGGTGGCGAAACACAGGTCCAGATAAACGGGAGCATAGA
CATATAAATCGTTGTAACCG

Downstream 100 bases:

>100_bases
CCCGATGAATTCTCAAATCAAAGAACGCTTCTACGATTTCGCCATCAGCAACGGCAATCACTATCCCCGATGGCGCAACC
CCCAGTCTACCCACCTCTTA

Product: putative regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Regulatory Protein; Transcriptional Regulator HTH_3 Family Protein; HTH_3 Family Transcriptional Regulator

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELVDVNPQTIGALERGDHSPSLDLALRICDVFNLPIEA
IFSRIPFTPLTAASLTQGA

Sequences:

>Translated_99_residues
MTIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELVDVNPQTIGALERGDHSPSLDLALRICDVFNLPIEA
IFSRIPFTPLTAASLTQGA
>Mature_98_residues
TIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELVDVNPQTIGALERGDHSPSLDLALRICDVFNLPIEAI
FSRIPFTPLTAASLTQGA

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11264; Mature: 11133

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELVDVNPQTIGALERGDH
CEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
SPSLDLALRICDVFNLPIEAIFSRIPFTPLTAASLTQGA
CCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure 
TIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELVDVNPQTIGALERGDH
EEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
SPSLDLALRICDVFNLPIEAIFSRIPFTPLTAASLTQGA
CCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA