| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232695
Identifier: 38232695
GI number: 38232695
Start: 51993
End: 52859
Strand: Reverse
Name: 38232695
Synonym: DIP0059
Alternate gene names: NA
Gene position: 52859-51993 (Counterclockwise)
Preceding gene: 38232696
Following gene: 38232694
Centisome position: 2.12
GC content: 53.63
Gene sequence:
>867_bases TTGTCGATCATGGGCAAAGTAGCCAAGCTCGATAGTGCTATGCAGCGTGGCTTGGATAATAGTTTCGCTTTCGTTTTCGG TGGCAAGCTCGTTCCGGCGGAGATTGAGGAACTGCTTAAGCAAGAGGTGCAGGATAATATCGTGCGCGCTTATGAGGGCG GTGTGGAGTCTCCGAATGTATTCCGTGTGCGTGTGAGCCGAAAGGATGCGCAGAATTTGGCCCAGCGGTATCCGTCGTTG GCTGATGATTTTGCGGATCGTTTGTCGCGTTATACGCGTAATCAGGGCTGGTCTACTGAGGGTCCGGTGGTGGTCACGAT CGCCGCGGATTCGGGTCTTCGCACTGGCCAGCTGCATGCGTCGTCAGCTTTTGATCCTGTCCCGCAGGAGTACAGCCACT TTATTGGGGTTGAAGATGATGTGGCGGCTGCAGCGCCTACCAATGATGAAAGCAACTATGAAAGCGAGTCCGGCATGAAT TCTTATGATGCTGACCCTCGGACGGAGTACATGACGGCGCAGGCGCCGGATGCTATTTATACGGAGGTTCCGGTTCCGGA GCCGAAGGCAACTCCGACGGTGAGCTTGTTGTTGCAGGATGGTTCGTCGCGGACGTATCTGGTGGAAGAGGGCTCGAATA TTATCGGGCGTTCTAATGAGGCCCATTTCCGGCTGCCGGATACGGGTGTGTCGCGTCAGCATGCGGAGATTACGTGGAAT GGCCGCGATGCCATTTTGACTGATTTGAAGTCAACGAATGGCACGACGGTGAATGACACTCCTGTGGAGAACTGGTTGTT GGAGGATGGCGACGTGATTACTGTTGGTCATTCTCATATTGAAGTTCGTATCGTAGAGCCGAATTAA
Upstream 100 bases:
>100_bases GTCAATGCGCACAGCTAGGGACATGGCCGTTGGACACCTATACTTAGTGCCATCGTGTTGTCACTATGTTTAACCGAGAA ATTTAAGGAGGCGAAGTTCT
Downstream 100 bases:
>100_bases GGAGCCCCACCTCGTGGAATCCGTCATTGTTTTTTTGCTGCGCATTGCCTTGTTGGTTTTGTTGTGGCTCTTGATTCTTC TTGCTCTTTATATTCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; Xyppx Repeat-Containing Protein; Signal Transduction Protein; Signaling Protein; FHA Domain Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQDNIVRAYEGGVESPNVFRVRVSRKDAQNLAQRYPSL ADDFADRLSRYTRNQGWSTEGPVVVTIAADSGLRTGQLHASSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMN SYDADPRTEYMTAQAPDAIYTEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAHFRLPDTGVSRQHAEITWN GRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIEVRIVEPN
Sequences:
>Translated_288_residues MSIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQDNIVRAYEGGVESPNVFRVRVSRKDAQNLAQRYPSL ADDFADRLSRYTRNQGWSTEGPVVVTIAADSGLRTGQLHASSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMN SYDADPRTEYMTAQAPDAIYTEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAHFRLPDTGVSRQHAEITWN GRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIEVRIVEPN >Mature_287_residues SIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQDNIVRAYEGGVESPNVFRVRVSRKDAQNLAQRYPSLA DDFADRLSRYTRNQGWSTEGPVVVTIAADSGLRTGQLHASSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMNS YDADPRTEYMTAQAPDAIYTEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAHFRLPDTGVSRQHAEITWNG RDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIEVRIVEPN
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31558; Mature: 31427
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQDNIVRAYEGGVESPNV CCCHHHHHHHHHHHHCCCCCCEEEEECCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCE FRVRVSRKDAQNLAQRYPSLADDFADRLSRYTRNQGWSTEGPVVVTIAADSGLRTGQLHA EEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEC SSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMNSYDADPRTEYMTAQAPDAIY CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE TEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAHFRLPDTGVSRQHAEITWN ECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEECCCCCCEEECCCCCCCCCCEEEEEC GRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIEVRIVEPN CCHHEEEHHHCCCCCCCCCCCCHHEEECCCCEEEECCCEEEEEEECCC >Mature Secondary Structure SIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQDNIVRAYEGGVESPNV CCHHHHHHHHHHHHCCCCCCEEEEECCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCE FRVRVSRKDAQNLAQRYPSLADDFADRLSRYTRNQGWSTEGPVVVTIAADSGLRTGQLHA EEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEC SSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMNSYDADPRTEYMTAQAPDAIY CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE TEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAHFRLPDTGVSRQHAEITWN ECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEECCCCCCEEECCCCCCCCCCEEEEEC GRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIEVRIVEPN CCHHEEEHHHCCCCCCCCCCCCHHEEECCCCEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA