| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is ilvE [H]
Identifier: 37681426
GI number: 37681426
Start: 3333132
End: 3334070
Strand: Direct
Name: ilvE [H]
Synonym: VV3242
Alternate gene names: 37681426
Gene position: 3333132-3334070 (Clockwise)
Preceding gene: 37681425
Following gene: 37681427
Centisome position: 99.36
GC content: 51.12
Gene sequence:
>939_bases ATGGCAACGAAAACAGCAGATTATATCTGGTTTAATGGCAAGATGGTTCCCTGGGCAGAAGCGAATGTACACGTTCTGAC TCACGCCATGCACTACGGCACCTCGGTATTTGAAGGGGTTCGCTGTTACAACACGCCAAAAGGGCCGATTGTCTTCCGTC ACCAAGAACATGCGCAGCGTCTGAAAGATTCTGCCAAAATTTACCGCTTCCCAATCCCCTATTCAGTAGAAGAGATCATG GAAGCGACTCGCGAAACTCTGCGTCAAAACAAGCTGGATAACGCCTACATTCGCCCACTGGCGTTTGTTGGCAACGTAGG CTTGGGCGTTTGTCCTCCCACAGATACCGAAATGGATCTGATCATTGCCGCCTTCCCTTGGGGCTCTTACTTAGGGGAAG AAGCGTTGGAAAATGGCGTTGATGCCATGGTATCCAGCTGGAACCGCGCTGCGCCAAACACGATTCCAACCGCAGCGAAA GCAGGCGGTAACTACCTCTCTTCTCTATTGGTTGGTGGTGAAGCACGTCGACATGGCTATGCCGAAGGGATTGCATTAAG TGTTGATGGTTACCTTTCAGAAGGTGCCGGTGAAAACATTTTTGTGATCAAAAATGGCGTCATCACAACCCCACCAGCGA CGGCTGCAATTCTCCCTGGCATCACTCGTGACTCAATCATGACGCTGGCGCGAGAGATGGGTTATGAAGTCCGTGAAGCC AACATCGCACGTGAAGCCCTCTACTTGGCAGACGAAGTGTTTATGACGGGTACTGCCGCAGAAGTGGTTCCGGTACGTAG TGTCGATCAAATTCAAGTGGGCGCAGGCAAACGCGGCCCAATCACCAAAGCGGTGCAAGAAGCGTACTTTGGTTTATTCA ATGGCACCACCGAAGATAAGTGGGGCTGGTTAGATTACGTGTACCCAGAGAAGAAGTAG
Upstream 100 bases:
>100_bases AATTGTGGGATATTCGTAGTGTTGAGGTGATGAAGATTCGTAACGACGAACTCCCTAACAACAATCTACAACAACACGTA AGTGCATAAGGAAGGCAATA
Downstream 100 bases:
>100_bases GGAGACAACAGAATGCCTAAATACAGATCAGCCACCACCACTCATGGTCGCAATATGGCCGGTGCGCGCGCACTATGGCG TGCTACGGGCGTAAAAGATG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MATKTADYIWFNGKMVPWAEANVHVLTHAMHYGTSVFEGVRCYNTPKGPIVFRHQEHAQRLKDSAKIYRFPIPYSVEEIM EATRETLRQNKLDNAYIRPLAFVGNVGLGVCPPTDTEMDLIIAAFPWGSYLGEEALENGVDAMVSSWNRAAPNTIPTAAK AGGNYLSSLLVGGEARRHGYAEGIALSVDGYLSEGAGENIFVIKNGVITTPPATAAILPGITRDSIMTLAREMGYEVREA NIAREALYLADEVFMTGTAAEVVPVRSVDQIQVGAGKRGPITKAVQEAYFGLFNGTTEDKWGWLDYVYPEKK
Sequences:
>Translated_312_residues MATKTADYIWFNGKMVPWAEANVHVLTHAMHYGTSVFEGVRCYNTPKGPIVFRHQEHAQRLKDSAKIYRFPIPYSVEEIM EATRETLRQNKLDNAYIRPLAFVGNVGLGVCPPTDTEMDLIIAAFPWGSYLGEEALENGVDAMVSSWNRAAPNTIPTAAK AGGNYLSSLLVGGEARRHGYAEGIALSVDGYLSEGAGENIFVIKNGVITTPPATAAILPGITRDSIMTLAREMGYEVREA NIAREALYLADEVFMTGTAAEVVPVRSVDQIQVGAGKRGPITKAVQEAYFGLFNGTTEDKWGWLDYVYPEKK >Mature_311_residues ATKTADYIWFNGKMVPWAEANVHVLTHAMHYGTSVFEGVRCYNTPKGPIVFRHQEHAQRLKDSAKIYRFPIPYSVEEIME ATRETLRQNKLDNAYIRPLAFVGNVGLGVCPPTDTEMDLIIAAFPWGSYLGEEALENGVDAMVSSWNRAAPNTIPTAAKA GGNYLSSLLVGGEARRHGYAEGIALSVDGYLSEGAGENIFVIKNGVITTPPATAAILPGITRDSIMTLAREMGYEVREAN IAREALYLADEVFMTGTAAEVVPVRSVDQIQVGAGKRGPITKAVQEAYFGLFNGTTEDKWGWLDYVYPEKK
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=288, Percent_Identity=28.8194444444444, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI38176287, Length=307, Percent_Identity=26.3843648208469, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI296010904, Length=308, Percent_Identity=26.9480519480519, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI296010906, Length=308, Percent_Identity=26.9480519480519, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI258614015, Length=260, Percent_Identity=29.6153846153846, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI48994963, Length=307, Percent_Identity=71.6612377850163, Blast_Score=484, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17565728, Length=282, Percent_Identity=28.7234042553192, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17568601, Length=284, Percent_Identity=30.6338028169014, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6322002, Length=289, Percent_Identity=28.0276816608997, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322608, Length=330, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641779, Length=323, Percent_Identity=26.625386996904, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 34200; Mature: 34069
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKTADYIWFNGKMVPWAEANVHVLTHAMHYGTSVFEGVRCYNTPKGPIVFRHQEHAQR CCCCCCCEEEECCEECCCCCCCHHHHHHHHHHCHHHHHCHHCCCCCCCCEEEECHHHHHH LKDSAKIYRFPIPYSVEEIMEATRETLRQNKLDNAYIRPLAFVGNVGLGVCPPTDTEMDL HHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEE IIAAFPWGSYLGEEALENGVDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGGEARRHGY EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHCCHHHHCCC AEGIALSVDGYLSEGAGENIFVIKNGVITTPPATAAILPGITRDSIMTLAREMGYEVREA CCCEEEEECCHHCCCCCCEEEEEECCEEECCCCHHHHCCCCCHHHHHHHHHHHCCHHHHH NIAREALYLADEVFMTGTAAEVVPVRSVDQIQVGAGKRGPITKAVQEAYFGLFNGTTEDK HHHHHHHHHHHHHHCCCCCHHEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC WGWLDYVYPEKK CCCEEECCCCCC >Mature Secondary Structure ATKTADYIWFNGKMVPWAEANVHVLTHAMHYGTSVFEGVRCYNTPKGPIVFRHQEHAQR CCCCCCEEEECCEECCCCCCCHHHHHHHHHHCHHHHHCHHCCCCCCCCEEEECHHHHHH LKDSAKIYRFPIPYSVEEIMEATRETLRQNKLDNAYIRPLAFVGNVGLGVCPPTDTEMDL HHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEE IIAAFPWGSYLGEEALENGVDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGGEARRHGY EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHCCHHHHCCC AEGIALSVDGYLSEGAGENIFVIKNGVITTPPATAAILPGITRDSIMTLAREMGYEVREA CCCEEEEECCHHCCCCCCEEEEEECCEEECCCCHHHHCCCCCHHHHHHHHHHHCCHHHHH NIAREALYLADEVFMTGTAAEVVPVRSVDQIQVGAGKRGPITKAVQEAYFGLFNGTTEDK HHHHHHHHHHHHHHCCCCCHHEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC WGWLDYVYPEKK CCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]