| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681307
Identifier: 37681307
GI number: 37681307
Start: 3204418
End: 3204684
Strand: Direct
Name: 37681307
Synonym: VV3123
Alternate gene names: NA
Gene position: 3204418-3204684 (Clockwise)
Preceding gene: 37681306
Following gene: 37681308
Centisome position: 95.53
GC content: 46.82
Gene sequence:
>267_bases ATGGCGTTCGAATCAACAGAACATGCTCAAGCCTACTGGAAGGAAAACTTGGGGATCATGGGATCACTGCTAGCAGTATG GTTTTTAGTGTCATACGGCGCTGGAATTTTATTTGTCGATGCACTTAATGCCATTCAGTTTGGTGGCTTCAAGCTCGGAT TTTGGTTCGCTCAGCAAGGGTCGATCTACACCTTTGTGGCGCTGATCTTTGTCTACGTTGTCCGCATGAATGCGCTGGAC AAGAAGTACAACGTGCAGGAAGACTAA
Upstream 100 bases:
>100_bases CTAAAGTTGCACAGATCCCTTGACTCAACACTGCTATCTTAGGAAACGTAACATTACGTTAACACTTATCTATTCAGACG AGAAACACAAGGAGAAGGCC
Downstream 100 bases:
>100_bases GAGGTTTAGGAAATGGATATTCAAACTTGGACGTTTATTCTTGTCGGTATCACTTTTGCTCTGTATATCGGCATCGCAAT CTGGGCCCGTGCGGGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAFESTEHAQAYWKENLGIMGSLLAVWFLVSYGAGILFVDALNAIQFGGFKLGFWFAQQGSIYTFVALIFVYVVRMNALD KKYNVQED
Sequences:
>Translated_88_residues MAFESTEHAQAYWKENLGIMGSLLAVWFLVSYGAGILFVDALNAIQFGGFKLGFWFAQQGSIYTFVALIFVYVVRMNALD KKYNVQED >Mature_87_residues AFESTEHAQAYWKENLGIMGSLLAVWFLVSYGAGILFVDALNAIQFGGFKLGFWFAQQGSIYTFVALIFVYVVRMNALDK KYNVQED
Specific function: Unknown
COG id: COG4327
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9971; Mature: 9839
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESTEHAQAYWKENLGIMGSLLAVWFLVSYGAGILFVDALNAIQFGGFKLGFWFAQQG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCC SIYTFVALIFVYVVRMNALDKKYNVQED CHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AFESTEHAQAYWKENLGIMGSLLAVWFLVSYGAGILFVDALNAIQFGGFKLGFWFAQQG CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCC SIYTFVALIFVYVVRMNALDKKYNVQED CHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA