| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is cpxA
Identifier: 37681298
GI number: 37681298
Start: 3194173
End: 3195561
Strand: Direct
Name: cpxA
Synonym: VV3114
Alternate gene names: 37681298
Gene position: 3194173-3195561 (Clockwise)
Preceding gene: 37681297
Following gene: 37681299
Centisome position: 95.22
GC content: 50.9
Gene sequence:
>1389_bases ATGCGCTTGCCGAAAATCACCAGTTTGTATGGGCGAATTTTTGCGATCTTCTGGTTTACCATGTTTTTGGTGCTGATGGC CGTCTTGGCTTTGCCCCACCTTGATCCTCGTAAGGCACGCAATATTCCGGCCGATCAATACGATCGCTTTATTGAAGCCA AGCAGGAGATCGAGAAGCAATATCGTGGCGAAACTGATCTTGGTCGCATTCTCTTTCGCATGGAGCGCCCCGGCGATCGC CATGGGCGAGATGGCCGGCCGCGCTTTTTCATCACCGATTACGATGGCAATATCCTCACCACCTTGAAGCAAGGGGATTT TCAACTCAAGGCGCTGAAAAACTTCGTCACCTCGATTGAACAACCCGATCAACCGAAACAAAAACTCTATGGCCGCTTTA TGCTCTCAGGGCCACTGCCAGTGACGCTAGCGAACAAAGAGTACTTACTTTACGTTGGGATGCGCTGGAACCAACCACCG CCTTTTTTACTGCGTATGTTTGATCATCCATTTCAGCTACTACTGGCTGTGATGCTGGTCAGTACCCCTTTACTGCTGTG GCTCGCGTGGGCACTCAGCCAACCCGCACGACGCTTAGAAAAAGCGGCGCAACGTGTCGCCAAAGGGGAATTTGTCACGG ATCCCTCTTTAGAAAAAGGCACCTCGGAGTTTCGCCAAGCCGGCGCCAGCTTCAACCGCATGGTCGAAGCGGTCAATCAA ATGATTTCAGGTCAGCAAAGGTTGCTGTCGGATATTTCCCATGAATTGCGTTCACCACTGACTCGCTTGAGAATGGCTAA TGCGCTTGCGACACGCAAACAGGGCGAAAGTAATGAGCTGCAACGAATTGATACCGAAGCGCAACGTTTGGAACAGATGA TCAGTGAACTGCTGGAGCTGTCTCGCATGCAGATGAATAGCCATTTGGATCGTGAAGAGCAGCCTGTCGCCAGCCTGTGG GAAGAGATCATTCAGGATGCACAATTTGAAGCGGAACAAATGGGCAAAGTATTGCAATACACCCCATTACCCGAGCGACA TATTTCCGGTAATCCCAAGCTGTTAATGAGCGCGATCGAAAACATCATTCGCAATGCCATCTACTACGGCAAAGACCAAG TGATCATCGCCATTCAAGCCATCGACGACACACTACATATCGTGGTGGATGATAATGGTGAAGGGGTACCTGAAGAGGAA CTCGAAGCCATTTTCCGTCCGTTTTATCGAGTCTCTACCGCTCGGGATCGTCATTCTGGAGGAACCGGGCTCGGCTTAAG CATCACCGAAAGCGCGATTCGTCAACACAGCGGCACCATAAAAGCAGAGCGCAGCGACCTTGGCGGTTTGCGAGTCACCA TTACTCTCCCACTGGTGAAAAGGCGTTAA
Upstream 100 bases:
>100_bases CGTTTCGAATTTGCGGAAAAAACTCCCTGAACGTGCGGATGGCAAATCTCGAATTAAAACCTTACGTGGCCGTGGCTACT TAATGATTGTGGAGTAACCG
Downstream 100 bases:
>100_bases TACCCTTACAAAGATCACAGTTGATAATGGTTATCATTAAGATTATGGTAAATCCTTCATCACCGGAGGATTTACCATGT CACACACTTTCCCTGAGCTT
Product: two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MRLPKITSLYGRIFAIFWFTMFLVLMAVLALPHLDPRKARNIPADQYDRFIEAKQEIEKQYRGETDLGRILFRMERPGDR HGRDGRPRFFITDYDGNILTTLKQGDFQLKALKNFVTSIEQPDQPKQKLYGRFMLSGPLPVTLANKEYLLYVGMRWNQPP PFLLRMFDHPFQLLLAVMLVSTPLLLWLAWALSQPARRLEKAAQRVAKGEFVTDPSLEKGTSEFRQAGASFNRMVEAVNQ MISGQQRLLSDISHELRSPLTRLRMANALATRKQGESNELQRIDTEAQRLEQMISELLELSRMQMNSHLDREEQPVASLW EEIIQDAQFEAEQMGKVLQYTPLPERHISGNPKLLMSAIENIIRNAIYYGKDQVIIAIQAIDDTLHIVVDDNGEGVPEEE LEAIFRPFYRVSTARDRHSGGTGLGLSITESAIRQHSGTIKAERSDLGGLRVTITLPLVKRR
Sequences:
>Translated_462_residues MRLPKITSLYGRIFAIFWFTMFLVLMAVLALPHLDPRKARNIPADQYDRFIEAKQEIEKQYRGETDLGRILFRMERPGDR HGRDGRPRFFITDYDGNILTTLKQGDFQLKALKNFVTSIEQPDQPKQKLYGRFMLSGPLPVTLANKEYLLYVGMRWNQPP PFLLRMFDHPFQLLLAVMLVSTPLLLWLAWALSQPARRLEKAAQRVAKGEFVTDPSLEKGTSEFRQAGASFNRMVEAVNQ MISGQQRLLSDISHELRSPLTRLRMANALATRKQGESNELQRIDTEAQRLEQMISELLELSRMQMNSHLDREEQPVASLW EEIIQDAQFEAEQMGKVLQYTPLPERHISGNPKLLMSAIENIIRNAIYYGKDQVIIAIQAIDDTLHIVVDDNGEGVPEEE LEAIFRPFYRVSTARDRHSGGTGLGLSITESAIRQHSGTIKAERSDLGGLRVTITLPLVKRR >Mature_462_residues MRLPKITSLYGRIFAIFWFTMFLVLMAVLALPHLDPRKARNIPADQYDRFIEAKQEIEKQYRGETDLGRILFRMERPGDR HGRDGRPRFFITDYDGNILTTLKQGDFQLKALKNFVTSIEQPDQPKQKLYGRFMLSGPLPVTLANKEYLLYVGMRWNQPP PFLLRMFDHPFQLLLAVMLVSTPLLLWLAWALSQPARRLEKAAQRVAKGEFVTDPSLEKGTSEFRQAGASFNRMVEAVNQ MISGQQRLLSDISHELRSPLTRLRMANALATRKQGESNELQRIDTEAQRLEQMISELLELSRMQMNSHLDREEQPVASLW EEIIQDAQFEAEQMGKVLQYTPLPERHISGNPKLLMSAIENIIRNAIYYGKDQVIIAIQAIDDTLHIVVDDNGEGVPEEE LEAIFRPFYRVSTARDRHSGGTGLGLSITESAIRQHSGTIKAERSDLGGLRVTITLPLVKRR
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=460, Percent_Identity=46.0869565217391, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI1787894, Length=324, Percent_Identity=30.8641975308642, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI1786783, Length=344, Percent_Identity=25.5813953488372, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1789808, Length=297, Percent_Identity=28.2828282828283, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI87082128, Length=275, Percent_Identity=27.2727272727273, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=28.0575539568345, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=28.8793103448276, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787374, Length=285, Percent_Identity=27.3684210526316, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=30.4545454545455, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI145693157, Length=236, Percent_Identity=27.5423728813559, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790861, Length=294, Percent_Identity=25.8503401360544, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789403, Length=331, Percent_Identity=26.8882175226586, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI48994928, Length=247, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789149, Length=213, Percent_Identity=26.2910798122066, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=27.9279279279279, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1790551, Length=277, Percent_Identity=26.7148014440433, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52924; Mature: 52924
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPKITSLYGRIFAIFWFTMFLVLMAVLALPHLDPRKARNIPADQYDRFIEAKQEIEKQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH YRGETDLGRILFRMERPGDRHGRDGRPRFFITDYDGNILTTLKQGDFQLKALKNFVTSIE HCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCC QPDQPKQKLYGRFMLSGPLPVTLANKEYLLYVGMRWNQPPPFLLRMFDHPFQLLLAVMLV CCCCHHHHHHHHHEECCCCCEEECCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH STPLLLWLAWALSQPARRLEKAAQRVAKGEFVTDPSLEKGTSEFRQAGASFNRMVEAVNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH MISGQQRLLSDISHELRSPLTRLRMANALATRKQGESNELQRIDTEAQRLEQMISELLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRMQMNSHLDREEQPVASLWEEIIQDAQFEAEQMGKVLQYTPLPERHISGNPKLLMSAIE HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHCCCCHHHHHHHHH NIIRNAIYYGKDQVIIAIQAIDDTLHIVVDDNGEGVPEEELEAIFRPFYRVSTARDRHSG HHHHHHHHCCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC GTGLGLSITESAIRQHSGTIKAERSDLGGLRVTITLPLVKRR CCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MRLPKITSLYGRIFAIFWFTMFLVLMAVLALPHLDPRKARNIPADQYDRFIEAKQEIEKQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH YRGETDLGRILFRMERPGDRHGRDGRPRFFITDYDGNILTTLKQGDFQLKALKNFVTSIE HCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCC QPDQPKQKLYGRFMLSGPLPVTLANKEYLLYVGMRWNQPPPFLLRMFDHPFQLLLAVMLV CCCCHHHHHHHHHEECCCCCEEECCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH STPLLLWLAWALSQPARRLEKAAQRVAKGEFVTDPSLEKGTSEFRQAGASFNRMVEAVNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH MISGQQRLLSDISHELRSPLTRLRMANALATRKQGESNELQRIDTEAQRLEQMISELLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRMQMNSHLDREEQPVASLWEEIIQDAQFEAEQMGKVLQYTPLPERHISGNPKLLMSAIE HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHCCCCHHHHHHHHH NIIRNAIYYGKDQVIIAIQAIDDTLHIVVDDNGEGVPEEELEAIFRPFYRVSTARDRHSG HHHHHHHHCCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC GTGLGLSITESAIRQHSGTIKAERSDLGGLRVTITLPLVKRR CCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]