Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is yjgM [H]

Identifier: 37681098

GI number: 37681098

Start: 2974791

End: 2975285

Strand: Direct

Name: yjgM [H]

Synonym: VV2914

Alternate gene names: 37681098

Gene position: 2974791-2975285 (Clockwise)

Preceding gene: 37681097

Following gene: 37681101

Centisome position: 88.68

GC content: 49.7

Gene sequence:

>495_bases
ATGTCAGAAAAAATGGACTTTGTCTTGCGCCCTATCACCGTTGAAGACAACGCCTCAATCGCCAATGTGATTCGTCAAGT
CTCGGCGGAGTATGGGTTAACCGCCGATAAAGGCTACAGTGTTGCCGACCCAACCCTAGACGATCTTTTTAGCATCTACT
CACAAGCAAATGCCGCCTATTGGGTGGTGGAACATCAAGGGAAGATCGTCGGTGGCGGTGGCTTTTCTGCGCTAGCAGGA
GTCCAAGGTGTCTGCGAGTTACAAAAAATGTACTTCTTACCCATTTGCCGTGGGCAGGGTCTGGCCAAGAAAATCGTTTC
GCTCAGCCGCAGCGCCGCGAAAAAGATGGGTTATCAACGCTGTTACCTAGAAACCACTGCCTGCTTGAAAGAAGCCATTG
CTCTGTATGAAAAGCTCGGATTTGAACATCTGCAAGCGCCACTCGGGCAAACCGGACATGACGCTTGTGAAGTGGTGATG
ATTTGCCATTTATAA

Upstream 100 bases:

>100_bases
GCGGCAAAACAAACCCTCGATTCGCACAGTTTTTGTTTGCACCCAACCGTGTAATGACTCTATAGTTTTGACCATCATAA
TTTGAAATACGAATGGTCTT

Downstream 100 bases:

>100_bases
GGCAACTAGCGGACAAAGTGGGTAACCGAAATCGCCTCATCGAGCACAACGGGTGCGCTCAGCGTCTGACCATCAAGCTC
AATCTCTAATTGATATGGTG

Product: histone acetyltransferase HPA2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAYWVVEHQGKIVGGGGFSALAG
VQGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQRCYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVM
ICHL

Sequences:

>Translated_164_residues
MSEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAYWVVEHQGKIVGGGGFSALAG
VQGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQRCYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVM
ICHL
>Mature_163_residues
SEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAYWVVEHQGKIVGGGGFSALAGV
QGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQRCYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVMI
CHL

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI48995002, Length=158, Percent_Identity=63.2911392405063, Blast_Score=185, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 17843; Mature: 17712

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAY
CCCCCCCEEECEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
WVVEHQGKIVGGGGFSALAGVQGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQR
EEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH
CYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVMICHL
HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHEECC
>Mature Secondary Structure 
SEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAY
CCCCCCEEECEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
WVVEHQGKIVGGGGFSALAGVQGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQR
EEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH
CYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVMICHL
HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]