| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is gshB [H]
Identifier: 37681052
GI number: 37681052
Start: 2923828
End: 2924784
Strand: Direct
Name: gshB [H]
Synonym: VV2868
Alternate gene names: 37681052
Gene position: 2923828-2924784 (Clockwise)
Preceding gene: 37681051
Following gene: 161486601
Centisome position: 87.16
GC content: 45.87
Gene sequence:
>957_bases GTGATGATCAAACTCGGCATCGTAATGGATCCAATTTCGTCCATTAACATTAAAAAAGATTCTAGCTTCGCCATGATGCT AGAAGCTCAACGTCGCGGTTGGGAAATCCATTATATGGAGATGAATGATCTACACTTAGATCAAGGCGTTGCTATTGCTG ACACCAAAGTGGTGCAACTGAAAGAAGATCCTAATGGTTGGTATGAGTTCACATCAGAACAAACCATCGAGTTGTCGGAA CTGGATGCGGTCTTGATGCGTAAGGATCCTCCGTTTGATACGGAGTACATCTACGCGACCTACATTTTAGAGCGTGCGGA AGAGCAAGGCACCTTGATCGTCAACAAGCCTCAAAGCTTGCGCGATTGCAATGAAAAACTCTTTACCGCTTGGTTCCCAG AACTAACACCAACCACGATCGTGACGCGCAAAGCAGAGAAAATTAAAGCGTTTCGCCAAGAGCATGGCGACATCATTTTA AAACCGCTGGATGGTATGGGTGGTGCTTCGATTTTCCGTGTGAAAGAGAATGATCCTAACGTTTCAGTGATCATCGAAAC ACTGACCAACCATGGCCAAAATTACGCAATGGCGCAAACTTTCGTGCCTGATATCAGCAACGGTGACAAACGTATTCTGG TGGTGGATGGCGAACCGATGCCCTATTGCTTAGCACGTATTCCTGCTAAAGGGGAAACTCGTGGTAACTTGGCTGCTGGC GGCAGCGGTGAACCTCGACCACTGAGCGAAACCGACCTAAAAATTGCAAACGCAGTGGCTCCAACATTAAAAGAAAAAGG GCTTATTTTTGTTGGCTTGGATGTGATAGGCGATAAACTGACGGAAATTAACGTCACCAGTCCAACCTGTATTCGCGAAA TTGAAGCTGCCTTCGATATCTCGATTACCGGTAAACTAATGGACGCGATTGAACGTCGTTTACAAGCTCAAGCTTAA
Upstream 100 bases:
>100_bases CTCTGCTAGGACCACGTGTATTGCGCACAGAAACGGCAGCGTTAACGGCAATTACCGCCTTACAGGTTCGTTTCGGCGAT CTGGGATAACACGGAGAACA
Downstream 100 bases:
>100_bases ACATGAGTGTTGCAGAGCCAGCGATGGCTCTGCTGTAACAGATTGGAGTCCTGTATGAACCTGACAAATCATTTTCTGGT TGCGATGCCGGGTATGAAAG
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase [H]
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MMIKLGIVMDPISSINIKKDSSFAMMLEAQRRGWEIHYMEMNDLHLDQGVAIADTKVVQLKEDPNGWYEFTSEQTIELSE LDAVLMRKDPPFDTEYIYATYILERAEEQGTLIVNKPQSLRDCNEKLFTAWFPELTPTTIVTRKAEKIKAFRQEHGDIIL KPLDGMGGASIFRVKENDPNVSVIIETLTNHGQNYAMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAG GSGEPRPLSETDLKIANAVAPTLKEKGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDISITGKLMDAIERRLQAQA
Sequences:
>Translated_318_residues MMIKLGIVMDPISSINIKKDSSFAMMLEAQRRGWEIHYMEMNDLHLDQGVAIADTKVVQLKEDPNGWYEFTSEQTIELSE LDAVLMRKDPPFDTEYIYATYILERAEEQGTLIVNKPQSLRDCNEKLFTAWFPELTPTTIVTRKAEKIKAFRQEHGDIIL KPLDGMGGASIFRVKENDPNVSVIIETLTNHGQNYAMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAG GSGEPRPLSETDLKIANAVAPTLKEKGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDISITGKLMDAIERRLQAQA >Mature_318_residues MMIKLGIVMDPISSINIKKDSSFAMMLEAQRRGWEIHYMEMNDLHLDQGVAIADTKVVQLKEDPNGWYEFTSEQTIELSE LDAVLMRKDPPFDTEYIYATYILERAEEQGTLIVNKPQSLRDCNEKLFTAWFPELTPTTIVTRKAEKIKAFRQEHGDIIL KPLDGMGGASIFRVKENDPNVSVIIETLTNHGQNYAMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAG GSGEPRPLSETDLKIANAVAPTLKEKGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDISITGKLMDAIERRLQAQA
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1789316, Length=316, Percent_Identity=74.0506329113924, Blast_Score=496, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N [H]
EC number: =6.3.2.3 [H]
Molecular weight: Translated: 35429; Mature: 35429
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIKLGIVMDPISSINIKKDSSFAMMLEAQRRGWEIHYMEMNDLHLDQGVAIADTKVVQL CEEEEEEEECCCCCCEEECCCCEEEEEEHHHCCCEEEEEEECCEECCCCEEEECEEEEEE KEDPNGWYEFTSEQTIELSELDAVLMRKDPPFDTEYIYATYILERAEEQGTLIVNKPQSL EECCCCCEEECCCCEEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHH RDCNEKLFTAWFPELTPTTIVTRKAEKIKAFRQEHGDIILKPLDGMGGASIFRVKENDPN HHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCC VSVIIETLTNHGQNYAMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAG EEEEEEEHHCCCCCEEEHEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEECC GSGEPRPLSETDLKIANAVAPTLKEKGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDI CCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCEEEEECCCCHHHHHHHHHEEE SITGKLMDAIERRLQAQA EEHHHHHHHHHHHHHCCC >Mature Secondary Structure MMIKLGIVMDPISSINIKKDSSFAMMLEAQRRGWEIHYMEMNDLHLDQGVAIADTKVVQL CEEEEEEEECCCCCCEEECCCCEEEEEEHHHCCCEEEEEEECCEECCCCEEEECEEEEEE KEDPNGWYEFTSEQTIELSELDAVLMRKDPPFDTEYIYATYILERAEEQGTLIVNKPQSL EECCCCCEEECCCCEEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHH RDCNEKLFTAWFPELTPTTIVTRKAEKIKAFRQEHGDIILKPLDGMGGASIFRVKENDPN HHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCC VSVIIETLTNHGQNYAMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAG EEEEEEEHHCCCCCEEEHEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEECC GSGEPRPLSETDLKIANAVAPTLKEKGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDI CCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCEEEEECCCCHHHHHHHHHEEE SITGKLMDAIERRLQAQA EEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]