| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is ytfK [H]
Identifier: 37681028
GI number: 37681028
Start: 2902404
End: 2902610
Strand: Direct
Name: ytfK [H]
Synonym: VV2844
Alternate gene names: 37681028
Gene position: 2902404-2902610 (Clockwise)
Preceding gene: 37681027
Following gene: 37681032
Centisome position: 86.52
GC content: 40.1
Gene sequence:
>207_bases ATGAGACTGTTTAAGCGCTATACACCAGGTATGATTGCTAAACACGTGAGTCGACTATTTAAGGGAAGAATTTACATTTA CGGCGTAGGAAAATTTGAGTTTGATAATGGTAAATTGATCCTGCCAGCAAAAGCTGAGCAAAAGCATTTTCAAACCGTGA AAGAAGTCAATCAGGAGATCATGAAGCTGCGCTGTGCCTACGCTTAA
Upstream 100 bases:
>100_bases CACGAAAGACTTAGCTCTATTTTAATCCAGAGATGTCACACATTTAAGTCACAGTAACTGTTAGACTAGCGGAGCTGATT GAGAAAAAAGGAAAGTAAGT
Downstream 100 bases:
>100_bases TTGTCTTGTCGATAAAACAAGATAACCCACTGAATTCAATAAAAAGGGCTGGTTTTCAGCCCTTTCTTTTTATTCTCACT ATGAGCGAATCAGCTCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MRLFKRYTPGMIAKHVSRLFKGRIYIYGVGKFEFDNGKLILPAKAEQKHFQTVKEVNQEIMKLRCAYA
Sequences:
>Translated_68_residues MRLFKRYTPGMIAKHVSRLFKGRIYIYGVGKFEFDNGKLILPAKAEQKHFQTVKEVNQEIMKLRCAYA >Mature_68_residues MRLFKRYTPGMIAKHVSRLFKGRIYIYGVGKFEFDNGKLILPAKAEQKHFQTVKEVNQEIMKLRCAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082392, Length=68, Percent_Identity=44.1176470588235, Blast_Score=72, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009491 - ProDom: PD055267 [H]
Pfam domain/function: PF06526 DUF1107 [H]
EC number: NA
Molecular weight: Translated: 8009; Mature: 8009
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFKRYTPGMIAKHVSRLFKGRIYIYGVGKFEFDNGKLILPAKAEQKHFQTVKEVNQEI CCCCHHCCCCHHHHHHHHHHCCEEEEEECCEEEECCCEEEEECCCHHHHHHHHHHHHHHH MKLRCAYA HHHHHCCC >Mature Secondary Structure MRLFKRYTPGMIAKHVSRLFKGRIYIYGVGKFEFDNGKLILPAKAEQKHFQTVKEVNQEI CCCCHHCCCCHHHHHHHHHHCCEEEEEECCEEEECCCEEEEECCCHHHHHHHHHHHHHHH MKLRCAYA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]