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The map label for this gene is ndvB [H]

Identifier: 37680926

GI number: 37680926

Start: 2788113

End: 2790524

Strand: Direct

Name: ndvB [H]

Synonym: VV2742

Alternate gene names: 37680926

Gene position: 2788113-2790524 (Clockwise)

Preceding gene: 37680925

Following gene: 37680927

Centisome position: 83.12

GC content: 49.5

Gene sequence:

>2412_bases
ATGACAATGAAATACGGCTATTTCGATAATGACAATCGTGAATACGTCATCACTCGCCCGGATGTACCGGCACCATGGAC
CAACTACTTAGGTACCGAAAAATTCTGTACCGTTATTTCACACAACGCAGGGGGATACTCTTTCTATCACTCTCCTGAGT
ACAACCGTGTGACCAAGTTCCGTCCAAACTTTACTCAAGATCGTCCGGGGCACTATGTCTACCTACGCGATGATGCAACG
GGTGATTACTGGTCAATTTCATGGCAGCCTGTGGCGAAAAGCCTAGAGCAGGCGAAATACGAAGTTCGTCACGGCCTGTC
TTATTCCAAGTTTAAGTGTGAATACAATGGCATTGTTGCCAACAAAACCCTGTTTGTACCAAAAGGTGAAGACGCGGAAG
TTTGGGACGTTGAAATCGAGAACACCTCTGACGAAGTGCGCACCATCAGTGCATTCAACTACGTCGAGTTTTCTTTCAGC
CACATTAAGTCGGACAACCAAAACCATCAGATGTCCTTGTACTCTGCGGGTACTGAGTACAAAGATGGCGTGATTGAATA
CGATCTATACTACAACACCGACGACTTCCTAGGTTTCTACTACCTAACAGCCACGTTTGATGCTGACAGCTACGACGGCC
AACGCGATGTCTTCCTAGGTATGTACCGTGACGAAGCAAACCCAATCGCTGTGGCACAAGGCAAATGTTCTAACACTGCA
CAAACCTGTTACAACCACTGTGGCGCTTTGCACAAACAATTCGTTCTACAACCAGGCGAAAAAGTCCGCTTTGCTGTAAT
TCTTGGTGTTGGTAAAGGGAACGGCGCGAAACTGCGCGAGAAATACCAAGATCTTGCTAAAGTCGATCAGGCCTTTGCCG
GTATCAAAGCACACTGGGATGAGCGTTGTGAGAAGTTCCAAGTGAAATCACCAAACGCAGGTTTGGATACCATGATCAAC
GCATGGACTCTATACCAAGCAGAAACGTGTGTGGTGTGGTCTCGTTTTGCCTCTTTCATTGAAGTGGGTGGCCGCACAGG
CTTGGGTTACCGCGATACCGCGCAAGACGCAATTTCGGTTCCTCACACCAACCCAGAGATGACACGTAAGCGCTTGGTTG
ATCTGCTTCGCGGCCAAGTGAAAGCCGGCTACGGTTTGCACCTATTTGATCCAGATTGGTTCGACCCAGAAAAAGCGGAT
GTTAAACCATCAAAATCACCAACCGTTGTCCCAACACCATCTGACGATGACAAGATCCACGGTATCAAGGATACCTGTTC
AGACGATCATCTATGGATCGTACCAACCATCTTGAACTATGTGAAAGAGACGGGTGATATCGGCTTTATTGATGAAGTGA
TTCCTTATGCAGACGGCGGCAACGCGACTGTGTATGAGCACATGATGGCGGCGCTGGATTTCTCCGCAGAATACGTCGGT
CAAACGGGTATCTGTAAAGGTCTACGCGCAGACTGGAACGACTGTCTAAACCTAGGTGGTGGTGAGTCTTCCATGGTGTC
ATTCCTGCATTTCTGGGCACTGGAAGCCTTCCTAGAGCTTTCTCGCTTCCGTAATGACGAAGCGGCGACAGACAAATACC
AAGCGATGGCAAGCGGCGTTCGTGAAGCGTGTGAAACTCATTTGTGGGATGAGAAAGGCGAATGGTACATCCGTGGTTTG
ACCAAAGATGGCGACAAGATCGGTACCTTCGACCAAGTGGAAGGCAAAGTGCACCTTGAGTCAAACTCGCTGGCAGTACT
GTCTGGCGCAGTCAGCCACGAGCGCGGCATCAAGGCGATGGACGCGGTATACGAGTACCTGTTCTCAAAATACGGCCTAC
ACCTAAACGCACCATCGTTCGCGACACCAAACGATGATATTGGTTTCGTCACTCGCGTTTACCAAGGCGTGAAAGAAAAC
GGCGCTATCTTCTCGCATCCAAACCCATGGGCTTGGGTAGCGGAAGCGAAACTGGGCCGTGGTGATCGCGCAATGGAGCT
TTACGACTCACTCAACCCATACAACCAAAACGACATCATTGAAACGCGCATGGCAGAACCGTACTCGTACGTTCAGTTCA
TCATGGGCCGTGACCACCAAGACCATGGTCGTGCAAACCACCCTTGGTTAACGGGAACCTCAGGTTGGGCTTACTACGCC
ACCACCAACTTCATTCTCGGTGTGCGTACTGGTTTTGATTCACTTGAGATCGACCCATGTATTCCAACAGCGTGGCCTGG
TTTTGAAGTGACTCGTCAATGGCGTGGCGCGACTTACCAAATCAAAGTAGAAAACCCACAAGGTGTTTCTAAGGGCGTTA
AATCCATCACATTAAATGGTCAAGCGATCGAAGGTGCCGTTCCTGCGCAGGCAGAAGGCACCGTGAATGAGGTTGTGGTC
GTTTTGGGTTAA

Upstream 100 bases:

>100_bases
CCAGCCATGGAAATGAACAACCGAATGAAAGCCTCGCTTTCCTAAGTTTTCACTAGCTTTAGTTTTTGACTGCCTTACCA
AGCAGTTTGTTGAAAAGGAA

Downstream 100 bases:

>100_bases
TCCCATCACGTTATCGCTAGCAAATAGTTTGGGGAATGGCCTACGGGCCATTTCCTAAGGGAGATCGAATTATGATCAAA
TTTGGAACCGGTGGCTGGCG

Product: cellobiose phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 803; Mature: 802

Protein sequence:

>803_residues
MTMKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYHSPEYNRVTKFRPNFTQDRPGHYVYLRDDAT
GDYWSISWQPVAKSLEQAKYEVRHGLSYSKFKCEYNGIVANKTLFVPKGEDAEVWDVEIENTSDEVRTISAFNYVEFSFS
HIKSDNQNHQMSLYSAGTEYKDGVIEYDLYYNTDDFLGFYYLTATFDADSYDGQRDVFLGMYRDEANPIAVAQGKCSNTA
QTCYNHCGALHKQFVLQPGEKVRFAVILGVGKGNGAKLREKYQDLAKVDQAFAGIKAHWDERCEKFQVKSPNAGLDTMIN
AWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPHTNPEMTRKRLVDLLRGQVKAGYGLHLFDPDWFDPEKAD
VKPSKSPTVVPTPSDDDKIHGIKDTCSDDHLWIVPTILNYVKETGDIGFIDEVIPYADGGNATVYEHMMAALDFSAEYVG
QTGICKGLRADWNDCLNLGGGESSMVSFLHFWALEAFLELSRFRNDEAATDKYQAMASGVREACETHLWDEKGEWYIRGL
TKDGDKIGTFDQVEGKVHLESNSLAVLSGAVSHERGIKAMDAVYEYLFSKYGLHLNAPSFATPNDDIGFVTRVYQGVKEN
GAIFSHPNPWAWVAEAKLGRGDRAMELYDSLNPYNQNDIIETRMAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYYA
TTNFILGVRTGFDSLEIDPCIPTAWPGFEVTRQWRGATYQIKVENPQGVSKGVKSITLNGQAIEGAVPAQAEGTVNEVVV
VLG

Sequences:

>Translated_803_residues
MTMKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYHSPEYNRVTKFRPNFTQDRPGHYVYLRDDAT
GDYWSISWQPVAKSLEQAKYEVRHGLSYSKFKCEYNGIVANKTLFVPKGEDAEVWDVEIENTSDEVRTISAFNYVEFSFS
HIKSDNQNHQMSLYSAGTEYKDGVIEYDLYYNTDDFLGFYYLTATFDADSYDGQRDVFLGMYRDEANPIAVAQGKCSNTA
QTCYNHCGALHKQFVLQPGEKVRFAVILGVGKGNGAKLREKYQDLAKVDQAFAGIKAHWDERCEKFQVKSPNAGLDTMIN
AWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPHTNPEMTRKRLVDLLRGQVKAGYGLHLFDPDWFDPEKAD
VKPSKSPTVVPTPSDDDKIHGIKDTCSDDHLWIVPTILNYVKETGDIGFIDEVIPYADGGNATVYEHMMAALDFSAEYVG
QTGICKGLRADWNDCLNLGGGESSMVSFLHFWALEAFLELSRFRNDEAATDKYQAMASGVREACETHLWDEKGEWYIRGL
TKDGDKIGTFDQVEGKVHLESNSLAVLSGAVSHERGIKAMDAVYEYLFSKYGLHLNAPSFATPNDDIGFVTRVYQGVKEN
GAIFSHPNPWAWVAEAKLGRGDRAMELYDSLNPYNQNDIIETRMAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYYA
TTNFILGVRTGFDSLEIDPCIPTAWPGFEVTRQWRGATYQIKVENPQGVSKGVKSITLNGQAIEGAVPAQAEGTVNEVVV
VLG
>Mature_802_residues
TMKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYHSPEYNRVTKFRPNFTQDRPGHYVYLRDDATG
DYWSISWQPVAKSLEQAKYEVRHGLSYSKFKCEYNGIVANKTLFVPKGEDAEVWDVEIENTSDEVRTISAFNYVEFSFSH
IKSDNQNHQMSLYSAGTEYKDGVIEYDLYYNTDDFLGFYYLTATFDADSYDGQRDVFLGMYRDEANPIAVAQGKCSNTAQ
TCYNHCGALHKQFVLQPGEKVRFAVILGVGKGNGAKLREKYQDLAKVDQAFAGIKAHWDERCEKFQVKSPNAGLDTMINA
WTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPHTNPEMTRKRLVDLLRGQVKAGYGLHLFDPDWFDPEKADV
KPSKSPTVVPTPSDDDKIHGIKDTCSDDHLWIVPTILNYVKETGDIGFIDEVIPYADGGNATVYEHMMAALDFSAEYVGQ
TGICKGLRADWNDCLNLGGGESSMVSFLHFWALEAFLELSRFRNDEAATDKYQAMASGVREACETHLWDEKGEWYIRGLT
KDGDKIGTFDQVEGKVHLESNSLAVLSGAVSHERGIKAMDAVYEYLFSKYGLHLNAPSFATPNDDIGFVTRVYQGVKENG
AIFSHPNPWAWVAEAKLGRGDRAMELYDSLNPYNQNDIIETRMAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYYAT
TNFILGVRTGFDSLEIDPCIPTAWPGFEVTRQWRGATYQIKVENPQGVSKGVKSITLNGQAIEGAVPAQAEGTVNEVVVV
LG

Specific function: Involved in the production of beta-(1,2)-glucan. It is involved not only in invasion but also in bacteroid development [H]

COG id: COG3459

COG function: function code G; Cellobiose phosphorylase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.tumefaciens ChvB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR009342
- InterPro:   IPR019282
- InterPro:   IPR021478
- InterPro:   IPR011013
- InterPro:   IPR010383
- InterPro:   IPR010403 [H]

Pfam domain/function: PF06204 CBM_X; PF10091 DUF2329; PF11329 DUF3131; PF06165 Glyco_transf_36; PF06205 GT36_AF [H]

EC number: NA

Molecular weight: Translated: 90279; Mature: 90148

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYHSPEYNRVTKF
CCEEECEECCCCCEEEEECCCCCCCHHHHCCCHHHHHEEECCCCCEEEECCCCCCCEEEE
RPNFTQDRPGHYVYLRDDATGDYWSISWQPVAKSLEQAKYEVRHGLSYSKFKCEYNGIVA
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEE
NKTLFVPKGEDAEVWDVEIENTSDEVRTISAFNYVEFSFSHIKSDNQNHQMSLYSAGTEY
CCEEEEECCCCCEEEEEEECCCCCHHEEEEEECEEEEEHHHHCCCCCCCEEEEEECCCCC
KDGVIEYDLYYNTDDFLGFYYLTATFDADSYDGQRDVFLGMYRDEANPIAVAQGKCSNTA
CCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCCHH
QTCYNHCGALHKQFVLQPGEKVRFAVILGVGKGNGAKLREKYQDLAKVDQAFAGIKAHWD
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERCEKFQVKSPNAGLDTMINAWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISV
HHHHEEECCCCCCCHHHHHHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC
PHTNPEMTRKRLVDLLRGQVKAGYGLHLFDPDWFDPEKADVKPSKSPTVVPTPSDDDKIH
CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
GIKDTCSDDHLWIVPTILNYVKETGDIGFIDEVIPYADGGNATVYEHMMAALDFSAEYVG
CCCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCC
QTGICKGLRADWNDCLNLGGGESSMVSFLHFWALEAFLELSRFRNDEAATDKYQAMASGV
CCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
REACETHLWDEKGEWYIRGLTKDGDKIGTFDQVEGKVHLESNSLAVLSGAVSHERGIKAM
HHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEECCCCEEEEECCHHHHHCCHHH
DAVYEYLFSKYGLHLNAPSFATPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAEAKLGR
HHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCC
GDRAMELYDSLNPYNQNDIIETRMAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYYA
CCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEE
TTNFILGVRTGFDSLEIDPCIPTAWPGFEVTRQWRGATYQIKVENPQGVSKGVKSITLNG
EEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCHHCCCEEEEECC
QAIEGAVPAQAEGTVNEVVVVLG
CEECCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TMKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYHSPEYNRVTKF
CEEECEECCCCCEEEEECCCCCCCHHHHCCCHHHHHEEECCCCCEEEECCCCCCCEEEE
RPNFTQDRPGHYVYLRDDATGDYWSISWQPVAKSLEQAKYEVRHGLSYSKFKCEYNGIVA
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEE
NKTLFVPKGEDAEVWDVEIENTSDEVRTISAFNYVEFSFSHIKSDNQNHQMSLYSAGTEY
CCEEEEECCCCCEEEEEEECCCCCHHEEEEEECEEEEEHHHHCCCCCCCEEEEEECCCCC
KDGVIEYDLYYNTDDFLGFYYLTATFDADSYDGQRDVFLGMYRDEANPIAVAQGKCSNTA
CCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCCHH
QTCYNHCGALHKQFVLQPGEKVRFAVILGVGKGNGAKLREKYQDLAKVDQAFAGIKAHWD
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERCEKFQVKSPNAGLDTMINAWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISV
HHHHEEECCCCCCCHHHHHHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC
PHTNPEMTRKRLVDLLRGQVKAGYGLHLFDPDWFDPEKADVKPSKSPTVVPTPSDDDKIH
CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
GIKDTCSDDHLWIVPTILNYVKETGDIGFIDEVIPYADGGNATVYEHMMAALDFSAEYVG
CCCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCC
QTGICKGLRADWNDCLNLGGGESSMVSFLHFWALEAFLELSRFRNDEAATDKYQAMASGV
CCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
REACETHLWDEKGEWYIRGLTKDGDKIGTFDQVEGKVHLESNSLAVLSGAVSHERGIKAM
HHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEECCCCEEEEECCHHHHHCCHHH
DAVYEYLFSKYGLHLNAPSFATPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAEAKLGR
HHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCC
GDRAMELYDSLNPYNQNDIIETRMAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYYA
CCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEE
TTNFILGVRTGFDSLEIDPCIPTAWPGFEVTRQWRGATYQIKVENPQGVSKGVKSITLNG
EEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCHHCCCEEEEECC
QAIEGAVPAQAEGTVNEVVVVLG
CEECCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2154461; 11481430 [H]