| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679996
Identifier: 37679996
GI number: 37679996
Start: 1845213
End: 1845443
Strand: Direct
Name: 37679996
Synonym: VV1812
Alternate gene names: NA
Gene position: 1845213-1845443 (Clockwise)
Preceding gene: 37679992
Following gene: 37680005
Centisome position: 55.01
GC content: 41.13
Gene sequence:
>231_bases ATGAAAGCCCTCATTTATGAAACGCTTGTAAACCTTGCAAACCAAGACCCAGAACAACATGCAACCATAAGACAAAACCT TTATGAGCAGTTGGATTTGCCTTTTGATAAACAACTGGCTTTGTATGCAGGTGCTCTCGGGCCGGCCAGCTCAGGAAAAT TAGAAAACCACGAAGCTATCAGTAATGCTGTAGATAGCGTTGTTCAATTATTAGAAATTCCTGAACACTGA
Upstream 100 bases:
>100_bases CCTCTTAAACGCCTTGTTATGTGATTGTTGCGTAAGAATTACAAGCTCTACACGCGTACAATGATATGCACCCCGTAAAC TATAATAAAATGGACATTAC
Downstream 100 bases:
>100_bases TCCTTACCACTTCTATAACGGCTCTTATCCCCAAGAGCCGTTTTAGCGACAGTCACATAACGCTGCGTTAAGGGGTGAAT GCCGCATAAACCAACTTTCC
Product: PAS factor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH
Sequences:
>Translated_76_residues MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH >Mature_76_residues MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8399; Mature: 8399
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAI CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHH SNAVDSVVQLLEIPEH HHHHHHHHHHHHCCCC >Mature Secondary Structure MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAI CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHH SNAVDSVVQLLEIPEH HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA