Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679996

Identifier: 37679996

GI number: 37679996

Start: 1845213

End: 1845443

Strand: Direct

Name: 37679996

Synonym: VV1812

Alternate gene names: NA

Gene position: 1845213-1845443 (Clockwise)

Preceding gene: 37679992

Following gene: 37680005

Centisome position: 55.01

GC content: 41.13

Gene sequence:

>231_bases
ATGAAAGCCCTCATTTATGAAACGCTTGTAAACCTTGCAAACCAAGACCCAGAACAACATGCAACCATAAGACAAAACCT
TTATGAGCAGTTGGATTTGCCTTTTGATAAACAACTGGCTTTGTATGCAGGTGCTCTCGGGCCGGCCAGCTCAGGAAAAT
TAGAAAACCACGAAGCTATCAGTAATGCTGTAGATAGCGTTGTTCAATTATTAGAAATTCCTGAACACTGA

Upstream 100 bases:

>100_bases
CCTCTTAAACGCCTTGTTATGTGATTGTTGCGTAAGAATTACAAGCTCTACACGCGTACAATGATATGCACCCCGTAAAC
TATAATAAAATGGACATTAC

Downstream 100 bases:

>100_bases
TCCTTACCACTTCTATAACGGCTCTTATCCCCAAGAGCCGTTTTAGCGACAGTCACATAACGCTGCGTTAAGGGGTGAAT
GCCGCATAAACCAACTTTCC

Product: PAS factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH

Sequences:

>Translated_76_residues
MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH
>Mature_76_residues
MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8399; Mature: 8399

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAI
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
SNAVDSVVQLLEIPEH
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAI
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
SNAVDSVVQLLEIPEH
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA