| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is yniA [C]
Identifier: 37679911
GI number: 37679911
Start: 1782973
End: 1783869
Strand: Direct
Name: yniA [C]
Synonym: VV1727
Alternate gene names: 37679911
Gene position: 1782973-1783869 (Clockwise)
Preceding gene: 37679907
Following gene: 37679912
Centisome position: 53.15
GC content: 43.7
Gene sequence:
>897_bases ATGTGCGGTTATCAAAAAGAGAGGACGACTATGTGGCAGGCCATTTCTCAACAGCTTTCTGAAACCTTAATGTTTTCCTA CGATATCGTTGAAAAAGTGCATTTGTCTGGTGGCGACATCAATGAATGCTATATGATCAGCGATGGTGAGCAGCGCTATT TCGTTAAGATCAACTCAAAAGACTTTTTAAGCAAGTTCCAAGTTGAAGCCGAAAACCTGCGTTTGCTTCGCCAAACCGAC AGCGTCACCCTACCTGAGTTGGTTTTGATTGGTAATACCAAATCCAACGCATTTATCATCCTTAATTTCCTCCCGACAAA GCCCCTTGAAGATCCCGAGAACAGCTATATATTTGGTCAACAATTGGCTTATCTTCATCTTTGGGGAGAACAGAAAGAGT ATGGCTGCGATCAAGACAACTACTTAGGTGCGACTTTGCAACCCAATGCGTGGCATAAGAAGTGGTCTACCTTTTTCTCA GAGCAACGAATAGGCTGGCAATTGCAACTGCTGAAAGAAAAAGGGGTCACATTCGGAGTGATTGATGAGATTGTTGAAGT TGTTGCTCGGCAGTTACTTAACCACAATCCCCGCCCCTCTCTCATTCACGGCGATTTGTGGCATGGTAATGTGGCTTTGT CTGCCTTTGGGCCTATTTGTTATGACCCAGCCTGTTACTGGGGAGACCGCGAATGTGATATTGCGATGACGGAACTTTTT GGTGGATTTAGCGATGAGTTTTATCGTGGCTACGAAGATATTGCACCACTTCCTTTCGGTTATACTCAGCGCAAAGAGAT CTACAATCTTTATCATATTCTCAATCACTGTAACCAATTTGGCGGCCACTATTTAGAGCAGGCACAAAAATCGATCGACA AAATCCTTTCCTACTAA
Upstream 100 bases:
>100_bases GATTCACAGTTGTGTTAATTCGCGATTCAAAATAATCACAATGTTTGAAAAGTTTGTCAGTTAACCAAATCCGAAATTGA GTTATGAATTAAACTATTAG
Downstream 100 bases:
>100_bases CGTTGTTTTTAGATGTGCGTCATGCAATTTTCGACGCACATCACTATCAACTCTAAGAAAGCGTTTCAATATTGAGTTAA TAGTCAAGTTTCGTACTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MCGYQKERTTMWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTD SVTLPELVLIGNTKSNAFIILNFLPTKPLEDPENSYIFGQQLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFS EQRIGWQLQLLKEKGVTFGVIDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELF GGFSDEFYRGYEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY
Sequences:
>Translated_298_residues MCGYQKERTTMWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTD SVTLPELVLIGNTKSNAFIILNFLPTKPLEDPENSYIFGQQLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFS EQRIGWQLQLLKEKGVTFGVIDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELF GGFSDEFYRGYEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY >Mature_298_residues MCGYQKERTTMWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTD SVTLPELVLIGNTKSNAFIILNFLPTKPLEDPENSYIFGQQLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFS EQRIGWQLQLLKEKGVTFGVIDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELF GGFSDEFYRGYEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=280, Percent_Identity=29.2857142857143, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI11545906, Length=281, Percent_Identity=28.8256227758007, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1788019, Length=287, Percent_Identity=45.2961672473868, Blast_Score=283, Evalue=9e-78, Organism=Caenorhabditis elegans, GI212659227, Length=311, Percent_Identity=25.7234726688103, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: NA
Molecular weight: Translated: 34518; Mature: 34518
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGYQKERTTMWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCH DFLSKFQVEAENLRLLRQTDSVTLPELVLIGNTKSNAFIILNFLPTKPLEDPENSYIFGQ HHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEECC QLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQLLKEKGVTFGV EEEEEEEECCCHHCCCCCCCEECCEECCCHHHHHHHHHHHHHCCCHHEEEHHHCCCEEHH IDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELF HHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHH GGFSDEFYRGYEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY CCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCGYQKERTTMWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCH DFLSKFQVEAENLRLLRQTDSVTLPELVLIGNTKSNAFIILNFLPTKPLEDPENSYIFGQ HHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEECC QLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQLLKEKGVTFGV EEEEEEEECCCHHCCCCCCCEECCEECCCHHHHHHHHHHHHHCCCHHEEEHHHCCCEEHH IDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELF HHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHH GGFSDEFYRGYEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY CCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA