Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37679859

Identifier: 37679859

GI number: 37679859

Start: 1729120

End: 1729596

Strand: Direct

Name: 37679859

Synonym: VV1675

Alternate gene names: NA

Gene position: 1729120-1729596 (Clockwise)

Preceding gene: 37679858

Following gene: 37679860

Centisome position: 51.55

GC content: 42.98

Gene sequence:

>477_bases
ATGGTAAAGCCTTGGTATAAACAGTTTTGGCCGTGGTTTCTGATCATTTTGCCACTGACAGTGGTAGTGTGGACGATCGT
GACAGTGGTAATTTTTTCACAAAACTCAGTCTCTCTTGTCGCGGAGGATTACTATAAAAAAGGTAAAGGGATCAATATAG
ACATTAGTAAACTGAATGTCGCGAAAGAACTGGGGTTGAATGCCACCGTTTCTTCAGATAACAATGTCATTGTTATCGAA
TTCAGCAAAGGTGATCTTCCTCATTTTCCTGCGTTGACCGCAACATTTACACATCGCACTCTACCCGACCGAGATTTCAC
ACAATTGCTCACGGCGGATGCCAAAGGTGTCTATCGCTTATCGCTGGATCACAAAATGGAAGGGCCTTGGTTTATTGAGC
TTCAACCACATGACCAAAAGTGGTTAGTTCAAGGTCGCGTTACTTTCCCTTCTTCCGCAACTGTTTTGATGAACTAA

Upstream 100 bases:

>100_bases
AAAATAATAAGTAACATTTCAATAACAGCCCCTTTTTAAGGGGCTGTCTTTCCTTTAAATTAAAGCCCTTATCTTTCATT
TAGTTGTTGAGAACTTTTTT

Downstream 100 bases:

>100_bases
GACTATGACACAATCCTGTTATCACTGTGGTGAAGATGTACCGGTCAACACGGATTTTAAAGTTGAAATCTTAGGTGAAA
CTCGCGAAATGTGTTGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVKPWYKQFWPWFLIILPLTVVVWTIVTVVIFSQNSVSLVAEDYYKKGKGINIDISKLNVAKELGLNATVSSDNNVIVIE
FSKGDLPHFPALTATFTHRTLPDRDFTQLLTADAKGVYRLSLDHKMEGPWFIELQPHDQKWLVQGRVTFPSSATVLMN

Sequences:

>Translated_158_residues
MVKPWYKQFWPWFLIILPLTVVVWTIVTVVIFSQNSVSLVAEDYYKKGKGINIDISKLNVAKELGLNATVSSDNNVIVIE
FSKGDLPHFPALTATFTHRTLPDRDFTQLLTADAKGVYRLSLDHKMEGPWFIELQPHDQKWLVQGRVTFPSSATVLMN
>Mature_158_residues
MVKPWYKQFWPWFLIILPLTVVVWTIVTVVIFSQNSVSLVAEDYYKKGKGINIDISKLNVAKELGLNATVSSDNNVIVIE
FSKGDLPHFPALTATFTHRTLPDRDFTQLLTADAKGVYRLSLDHKMEGPWFIELQPHDQKWLVQGRVTFPSSATVLMN

Specific function: Unknown

COG id: COG3198

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18005; Mature: 18005

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPWYKQFWPWFLIILPLTVVVWTIVTVVIFSQNSVSLVAEDYYKKGKGINIDISKLNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHCCCCCEEEHHHHHH
AKELGLNATVSSDNNVIVIEFSKGDLPHFPALTATFTHRTLPDRDFTQLLTADAKGVYRL
HHHCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEE
SLDHKMEGPWFIELQPHDQKWLVQGRVTFPSSATVLMN
EECCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEC
>Mature Secondary Structure
MVKPWYKQFWPWFLIILPLTVVVWTIVTVVIFSQNSVSLVAEDYYKKGKGINIDISKLNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHCCCCCEEEHHHHHH
AKELGLNATVSSDNNVIVIEFSKGDLPHFPALTATFTHRTLPDRDFTQLLTADAKGVYRL
HHHCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEE
SLDHKMEGPWFIELQPHDQKWLVQGRVTFPSSATVLMN
EECCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA