| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ycbG [C]
Identifier: 37679848
GI number: 37679848
Start: 1719297
End: 1719746
Strand: Direct
Name: ycbG [C]
Synonym: VV1664
Alternate gene names: 37679848
Gene position: 1719297-1719746 (Clockwise)
Preceding gene: 37679845
Following gene: 37679849
Centisome position: 51.25
GC content: 40.67
Gene sequence:
>450_bases ATGAAATATCAACAACTCGAAAACTTGGAATGTGGGTGGAAATGGCAGTATTTGATCAATAAGTGGAAAGATGGAGAAAC CATCACTAAATATATTGATTCGAGTGAAGCTGACCATGCAGTTTCTGAACTAAGAAAGTTAGAACATGAACCGACCAAAG TCCTCGAGTGGATTGATTTGCACATGGCGGAGGAGTTGGACAAGAAACTCAAACAAGCCATTCGTGCTAAACGCAAGCGC CATTTCAATGCTGAGCAGATCCATACAAAGAAAAAATCCATCGATTTAGATTATCGTGTGTGGGAAAAGCTATCGACACG TGCGAATGAATTGGGTTGTACTTTGTCTGATGCCATTGAATATTTACTGAGTGAAGCTTCTCGTAGCGAAAAAGCGAGTG CGGCGGTATCCACTCTAAAAGAAGACTTAAGCAAGTTATTATCCGATTAG
Upstream 100 bases:
>100_bases GGAAAAAGTTGATCTCTCTCTATCCTTCGACCACGTTTTGTTGAGAATTAAACCTACATGGGTTACGCTGTCACCCTAAG TAGCGCTAGGACATGGAAAA
Downstream 100 bases:
>100_bases TGCAGGAGAACACACATGTTGTATGTCATTATCGTTGCCGCTATCGTTATCTTTTGGCTAGTGGCCATTGACCGCCCCGT ATTGAAAGTTTCCTTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDLHMAEELDKKLKQAIRAKRKR HFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIEYLLSEASRSEKASAAVSTLKEDLSKLLSD
Sequences:
>Translated_149_residues MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDLHMAEELDKKLKQAIRAKRKR HFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIEYLLSEASRSEKASAAVSTLKEDLSKLLSD >Mature_149_residues MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDLHMAEELDKKLKQAIRAKRKR HFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIEYLLSEASRSEKASAAVSTLKEDLSKLLSD
Specific function: Unknown
COG id: COG3120
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0268 family
Homologues:
Organism=Escherichia coli, GI1787190, Length=148, Percent_Identity=54.7297297297297, Blast_Score=162, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1664_VIBVY (Q7MKW4)
Other databases:
- EMBL: BA000037 - RefSeq: NP_934457.1 - STRING: Q7MKW4 - GeneID: 2624470 - GenomeReviews: BA000037_GR - KEGG: vvy:VV1664 - NMPDR: fig|196600.1.peg.1732 - eggNOG: COG3120 - HOGENOM: HBG297085 - OMA: ECGWKWK - ProtClustDB: PRK05097 - BioCyc: VVUL196600:VV1664-MONOMER - HAMAP: MF_01073 - InterPro: IPR009390 - ProDom: PD033720
Pfam domain/function: PF06303 DUF1047
EC number: NA
Molecular weight: Translated: 17451; Mature: 17451
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDL CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH HMAEELDKKLKQAIRAKRKRHFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH YLLSEASRSEKASAAVSTLKEDLSKLLSD HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDL CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH HMAEELDKKLKQAIRAKRKRHFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH YLLSEASRSEKASAAVSTLKEDLSKLLSD HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA