| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679843
Identifier: 37679843
GI number: 37679843
Start: 1714667
End: 1716391
Strand: Direct
Name: 37679843
Synonym: VV1659
Alternate gene names: NA
Gene position: 1714667-1716391 (Clockwise)
Preceding gene: 37679842
Following gene: 37679845
Centisome position: 51.12
GC content: 44.17
Gene sequence:
>1725_bases ATGAATTGCAGTATTAGATTCAAATTAACCACAGTCGCGCTACTTGTTGGTAGCGCTATGAATGCCAACGCTGCTTTGTA TGAAGTTGTCGAAGTTAAAGTTCCAACTCACATACAAAACTTAATTTCCGCAAATTATACCGATCCAAGTCGATATGATG TTTATGGTGTTGCTATTACACAAGGAGATGTAAAGGAAAAAGATGCTCTTGGTTTTTTTAGTGGAAATGTAGATCGTGAA GCAAATAAAGGACTAATGGTCGCTGCTGCGGAAACGAGGCAATCTGTAGATGGCGTTAGCTATAGAGAAGAGCTTCCATT TGCGATGGATGCGACGTTTGGCTATATCCAAGAGTTTGATGACTTTGAGCGTTATTGCTACAACGAGCTTCGTTATTCGA CCTGTGAAACTTGGGCATCGATTCATTGGGCACCATGGAGTCGCGAACGCAATGGCAACACGAGTTCTAATGCACTTGCT TATGTTGAAGGAGACGCTTCAGCCTATCACAATGAGATGAACAACGTTATCAATAGCCTCACGGAATCTGCACAACCTGT AGGCAATCAGAGCATTGCCGGTGAGACGCGAAATCGAGTTGTCGCGCCAATATCTCCTACAGATGTAAGCTCATTTTATC AATCACGAGCTTGGAAAACCGATGGTACTTACACCGTAGGCAGCGTTTCCTCAAAAACCGGTAATGAAAACGGCACACAC TATACGAGTAAAGCGGCTATTTGGGATAAGACAAAGACGGTTGTAGAAGTTCCTTGGTTGAGTGGCGTACCAGCAAAAGA TGGGGAGCGTTTAGCGCAAGGGAGTATGCGTGATGTGGTTGTCGATGACAAGGGTGATACAGACCCAGCGAATGATATAA TTTATGGTGTTGGTTACAACACTTACGCAGATGACAACTATATTAATGCCAGCGTGTTTGTTGGTACGTTTGACGCTAGC GGTACATTTGAAAATTCAAGTTGGGATACAAAGCAAGTTAGTGGCGCGCAGATGAAGATCAGCGGTGATATCATTCACAG TAATTCTGTTGTTACTAACGTAAACAGTAATTTTGTCGCAATAGGCGAAGCAAAGCGCGCTGGTGGTAAACCGTCTGAAG GTTCAGCAGCCAATCGACTATTCTTGGTAAAAGATGTTAGAGCCGAAAGTGTTTCGGCGACATTTCTACCTGAGTTAGGG GGGATCTTCTTCTCTGGTGCAGGCGGTAAAATGGGTGGCATCAACAAATACAATGAAATTGTTGGTCAGCTGGACGCTGA AGATACTCGTGAGATCGATGGCAAGCCGCGTCGTAAACGTGCATTTATTCTGCCTTATGAGGCAAATGGTTCTGTTGAAA GTAGAAGATCGATATTTGATAACAAAGCGTGGTATTTGGATGACCTTACCAATGGTTCTAACGCGCCTGTTGAAAACAAC CAATATCGTGTTATCGACGCAACGGATATCAATGATGCTGGTGTGATTTCCGCGACAGCAATCAAGTGTGAAGGTGGCTA CGATACGACCGCACACAACTCATATTGTGGTGAAGGTTCCAAAGAGGAAACAGTGGTTGCTGTTAAGCTAATCCCTATCG CCAATGCCGACGCCAATGACATAGAGAAACGTCCAGTTGAAAAAGCTGCAGCAGAGCGTAGCGGTGCAGGACTTGGTTGG TTGTCTTTGACATTACTGGTTTTATTTGGTTTCCGCAGAAAATAG
Upstream 100 bases:
>100_bases CCAGTGCTAGAGCAACTTGCCGCACTGGAGCAGGAATTAGAAATTGCTTTCGAGAGATGGGAAGAGCTCGAAGCTATGCA ACAGGACAGTTAATAAGTAG
Downstream 100 bases:
>100_bases GCTATTTTTTAAACTAGGCACAGCTTCACAATTTTGAAGTTGTGCCTTTTTTATCGCTTGAGAAATCCCTTCATTTGATC GATTCTTAATTGTGGAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MNCSIRFKLTTVALLVGSAMNANAALYEVVEVKVPTHIQNLISANYTDPSRYDVYGVAITQGDVKEKDALGFFSGNVDRE ANKGLMVAAAETRQSVDGVSYREELPFAMDATFGYIQEFDDFERYCYNELRYSTCETWASIHWAPWSRERNGNTSSNALA YVEGDASAYHNEMNNVINSLTESAQPVGNQSIAGETRNRVVAPISPTDVSSFYQSRAWKTDGTYTVGSVSSKTGNENGTH YTSKAAIWDKTKTVVEVPWLSGVPAKDGERLAQGSMRDVVVDDKGDTDPANDIIYGVGYNTYADDNYINASVFVGTFDAS GTFENSSWDTKQVSGAQMKISGDIIHSNSVVTNVNSNFVAIGEAKRAGGKPSEGSAANRLFLVKDVRAESVSATFLPELG GIFFSGAGGKMGGINKYNEIVGQLDAEDTREIDGKPRRKRAFILPYEANGSVESRRSIFDNKAWYLDDLTNGSNAPVENN QYRVIDATDINDAGVISATAIKCEGGYDTTAHNSYCGEGSKEETVVAVKLIPIANADANDIEKRPVEKAAAERSGAGLGW LSLTLLVLFGFRRK
Sequences:
>Translated_574_residues MNCSIRFKLTTVALLVGSAMNANAALYEVVEVKVPTHIQNLISANYTDPSRYDVYGVAITQGDVKEKDALGFFSGNVDRE ANKGLMVAAAETRQSVDGVSYREELPFAMDATFGYIQEFDDFERYCYNELRYSTCETWASIHWAPWSRERNGNTSSNALA YVEGDASAYHNEMNNVINSLTESAQPVGNQSIAGETRNRVVAPISPTDVSSFYQSRAWKTDGTYTVGSVSSKTGNENGTH YTSKAAIWDKTKTVVEVPWLSGVPAKDGERLAQGSMRDVVVDDKGDTDPANDIIYGVGYNTYADDNYINASVFVGTFDAS GTFENSSWDTKQVSGAQMKISGDIIHSNSVVTNVNSNFVAIGEAKRAGGKPSEGSAANRLFLVKDVRAESVSATFLPELG GIFFSGAGGKMGGINKYNEIVGQLDAEDTREIDGKPRRKRAFILPYEANGSVESRRSIFDNKAWYLDDLTNGSNAPVENN QYRVIDATDINDAGVISATAIKCEGGYDTTAHNSYCGEGSKEETVVAVKLIPIANADANDIEKRPVEKAAAERSGAGLGW LSLTLLVLFGFRRK >Mature_574_residues MNCSIRFKLTTVALLVGSAMNANAALYEVVEVKVPTHIQNLISANYTDPSRYDVYGVAITQGDVKEKDALGFFSGNVDRE ANKGLMVAAAETRQSVDGVSYREELPFAMDATFGYIQEFDDFERYCYNELRYSTCETWASIHWAPWSRERNGNTSSNALA YVEGDASAYHNEMNNVINSLTESAQPVGNQSIAGETRNRVVAPISPTDVSSFYQSRAWKTDGTYTVGSVSSKTGNENGTH YTSKAAIWDKTKTVVEVPWLSGVPAKDGERLAQGSMRDVVVDDKGDTDPANDIIYGVGYNTYADDNYINASVFVGTFDAS GTFENSSWDTKQVSGAQMKISGDIIHSNSVVTNVNSNFVAIGEAKRAGGKPSEGSAANRLFLVKDVRAESVSATFLPELG GIFFSGAGGKMGGINKYNEIVGQLDAEDTREIDGKPRRKRAFILPYEANGSVESRRSIFDNKAWYLDDLTNGSNAPVENN QYRVIDATDINDAGVISATAIKCEGGYDTTAHNSYCGEGSKEETVVAVKLIPIANADANDIEKRPVEKAAAERSGAGLGW LSLTLLVLFGFRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62295; Mature: 62295
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCSIRFKLTTVALLVGSAMNANAALYEVVEVKVPTHIQNLISANYTDPSRYDVYGVAIT CCCEEEEEHHEEEHHHCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEEE QGDVKEKDALGFFSGNVDREANKGLMVAAAETRQSVDGVSYREELPFAMDATFGYIQEFD CCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHCCCCCHHHHCCEEEHHHHHHHHHHH DFERYCYNELRYSTCETWASIHWAPWSRERNGNTSSNALAYVEGDASAYHNEMNNVINSL HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH TESAQPVGNQSIAGETRNRVVAPISPTDVSSFYQSRAWKTDGTYTVGSVSSKTGNENGTH HHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCE YTSKAAIWDKTKTVVEVPWLSGVPAKDGERLAQGSMRDVVVDDKGDTDPANDIIYGVGYN EECCEEEECCCCEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEEECCCC TYADDNYINASVFVGTFDASGTFENSSWDTKQVSGAQMKISGDIIHSNSVVTNVNSNFVA CCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEECEEEECCCEEEECCCCEEE IGEAKRAGGKPSEGSAANRLFLVKDVRAESVSATFLPELGGIFFSGAGGKMGGINKYNEI EECHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCHHHHH VGQLDAEDTREIDGKPRRKRAFILPYEANGSVESRRSIFDNKAWYLDDLTNGSNAPVENN HHCCCCCHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC QYRVIDATDINDAGVISATAIKCEGGYDTTAHNSYCGEGSKEETVVAVKLIPIANADAND CEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCH IEKRPVEKAAAERSGAGLGWLSLTLLVLFGFRRK HHHCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNCSIRFKLTTVALLVGSAMNANAALYEVVEVKVPTHIQNLISANYTDPSRYDVYGVAIT CCCEEEEEHHEEEHHHCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEEE QGDVKEKDALGFFSGNVDREANKGLMVAAAETRQSVDGVSYREELPFAMDATFGYIQEFD CCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHCCCCCHHHHCCEEEHHHHHHHHHHH DFERYCYNELRYSTCETWASIHWAPWSRERNGNTSSNALAYVEGDASAYHNEMNNVINSL HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH TESAQPVGNQSIAGETRNRVVAPISPTDVSSFYQSRAWKTDGTYTVGSVSSKTGNENGTH HHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCE YTSKAAIWDKTKTVVEVPWLSGVPAKDGERLAQGSMRDVVVDDKGDTDPANDIIYGVGYN EECCEEEECCCCEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEEECCCC TYADDNYINASVFVGTFDASGTFENSSWDTKQVSGAQMKISGDIIHSNSVVTNVNSNFVA CCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEECEEEECCCEEEECCCCEEE IGEAKRAGGKPSEGSAANRLFLVKDVRAESVSATFLPELGGIFFSGAGGKMGGINKYNEI EECHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCHHHHH VGQLDAEDTREIDGKPRRKRAFILPYEANGSVESRRSIFDNKAWYLDDLTNGSNAPVENN HHCCCCCHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC QYRVIDATDINDAGVISATAIKCEGGYDTTAHNSYCGEGSKEETVVAVKLIPIANADAND CEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCH IEKRPVEKAAAERSGAGLGWLSLTLLVLFGFRRK HHHCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA