Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679822

Identifier: 37679822

GI number: 37679822

Start: 1685191

End: 1685676

Strand: Direct

Name: 37679822

Synonym: VV1638

Alternate gene names: NA

Gene position: 1685191-1685676 (Clockwise)

Preceding gene: 37679819

Following gene: 37679824

Centisome position: 50.24

GC content: 44.03

Gene sequence:

>486_bases
ATGCTTACGTCACTACAAAAAGCCAATCTTTATCTCAATATGTTTGGGTTTTCTAAAGTCCCACTGATCTGGTTGTGTCG
CCCCAAAATCATTGCCATTGATGAAAAAATGGTGGAAGTGAAAATCCCCCTTAGAAAACGAACAAAGAATCACCTGAATA
GCATGTACTTCGGTGCATTAGCGGTTGGTGCGGATGTGGCAGGTGGTTTTTTGGCGATGAGCAAGGCCAAAAATCAAGGA
GAGAAAATTTCCTTGGCGTTTAAGGGCGTTAAGGCGGAGTTTCTTAAAAGGCCAGAGGCGGATGTGCATTTTGTTTGCCA
TGATGGCCCTTTGATCGATCAAATGCTGGCTCAAACCATGCAAACAGGTGAAAGGGTTAATCAAGATGTTCGAATTACCG
CGCTTTGTCCCACCTTGCATGGGGATGAGCCGATGGCCGAATTTGATTTAACCCTATCGATTAAAAAAGTGGTGCCTAGA
GCATAA

Upstream 100 bases:

>100_bases
CGTGATGGACTCAGCGACTTGATGATTTTTGTTAACAATTCTTTGACAACTGGCGCTGTGCGCAGGAAACTGGTCAGACT
AGTTATGAGGAAACGCCACT

Downstream 100 bases:

>100_bases
CGCTATGTTTCAGGCTGTTCGATTTTCTCGATGGCAACAATTTTCGAGCGATTCATGACAATTTTCCAGCGGTAGTAAAC
GGGCTCACCTTGGTGGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLTSLQKANLYLNMFGFSKVPLIWLCRPKIIAIDEKMVEVKIPLRKRTKNHLNSMYFGALAVGADVAGGFLAMSKAKNQG
EKISLAFKGVKAEFLKRPEADVHFVCHDGPLIDQMLAQTMQTGERVNQDVRITALCPTLHGDEPMAEFDLTLSIKKVVPR
A

Sequences:

>Translated_161_residues
MLTSLQKANLYLNMFGFSKVPLIWLCRPKIIAIDEKMVEVKIPLRKRTKNHLNSMYFGALAVGADVAGGFLAMSKAKNQG
EKISLAFKGVKAEFLKRPEADVHFVCHDGPLIDQMLAQTMQTGERVNQDVRITALCPTLHGDEPMAEFDLTLSIKKVVPR
A
>Mature_161_residues
MLTSLQKANLYLNMFGFSKVPLIWLCRPKIIAIDEKMVEVKIPLRKRTKNHLNSMYFGALAVGADVAGGFLAMSKAKNQG
EKISLAFKGVKAEFLKRPEADVHFVCHDGPLIDQMLAQTMQTGERVNQDVRITALCPTLHGDEPMAEFDLTLSIKKVVPR
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17927; Mature: 17927

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLQKANLYLNMFGFSKVPLIWLCRPKIIAIDEKMVEVKIPLRKRTKNHLNSMYFGAL
CCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHH
AVGADVAGGFLAMSKAKNQGEKISLAFKGVKAEFLKRPEADVHFVCHDGPLIDQMLAQTM
HHCCHHCCHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
QTGERVNQDVRITALCPTLHGDEPMAEFDLTLSIKKVVPRA
HHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEHHCCCCC
>Mature Secondary Structure
MLTSLQKANLYLNMFGFSKVPLIWLCRPKIIAIDEKMVEVKIPLRKRTKNHLNSMYFGAL
CCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHH
AVGADVAGGFLAMSKAKNQGEKISLAFKGVKAEFLKRPEADVHFVCHDGPLIDQMLAQTM
HHCCHHCCHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
QTGERVNQDVRITALCPTLHGDEPMAEFDLTLSIKKVVPRA
HHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA