Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679753

Identifier: 37679753

GI number: 37679753

Start: 1612980

End: 1613921

Strand: Direct

Name: 37679753

Synonym: VV1569

Alternate gene names: NA

Gene position: 1612980-1613921 (Clockwise)

Preceding gene: 37679752

Following gene: 37679754

Centisome position: 48.08

GC content: 48.51

Gene sequence:

>942_bases
ATGATGAAAAGGACTAAACTGATTACTGCAATCGCACTTGCATCGATTTTTGCACCACTCACCAGTGTTGCTGCAGACTA
CCCTAATCGCCCAGTAAAATACGTTGTGCCATGGCCTCCGGGTGATTTGGAAGACGTGCTGACTCGCCTAATTGCAGAAG
AGATGGCGAAAGAAACAGGCAAGCCAGCCACAGTCGTTAACAAACCTGGTGGCGCCGGAATCATTGGTGCAGCAGAAGTT
TCACGCGCGCGCCCAGATGGTCTGACGATCGGTTCGTTCGTTGCCGACATCCTCACCACGCACATTCTTTCTGGCAACGC
ACCGTTTGACCAAACAACATTCGAGCCTGTTGGGATCTTCCTAGATTATCCGTTTGTGATTGCCGCAAAAGCAGATGCAC
CATACAACAACCTAAAAGAGCTAGCTGATTACTCGCAAAGTAATCATGTTTCTCTGGCTCACTTTGGTTACCAAGCGCTG
CCAACCGCGATCACGTTTAAAGCGGCTGACCAAGCTGGGATTAAGTTCTCGTCAAACGCACCGTTTGATGCGATCAACTG
TTCGACCTTAGCTAACGGCGACGCGGATGTGGTCAATACCGTTACGCAAACCATCCTCTCTTGTTTGAAGTCTGGCGACG
TGAAAATCATCGCTTCGATTACGCACGAACGTTTAAGCATCAGCCCAGATGTGCCAACGCTTAAAGAACAAACTGGCGTA
GCACAAACAACGTGGAATGGCCTGTTTGTGAAGAAAGGCACACCTGACAACGTCAAACAAGTGATTGCAGATATCGCTCA
AAAAGCGCTTAAGACCGACAAAGTGACGGCGATCAGCCAAAACACCGGTGCCAACGTTTTTTGGATGGGTGGCAAAGAAG
CACAGCAAGTGATTGATAACGACTTTGCCAGTGCTAAAGAACTGCTGAACTACATGAAATAA

Upstream 100 bases:

>100_bases
AACAAAGTACTGCAGAAAACCGAAGTACCCGTATTGATAGTACCCATAGCGAAAAAGTAGAAATGCTGGGCATCACCAGC
TTCAGAGCACAAAAGGAATT

Downstream 100 bases:

>100_bases
GTCCTTTGGGTGAGTAAACATATCTGGTTCATTTACTCACCCTTTTTTCAGGGAGTTGAACGCATATGACGATTGAAATC
AACGAAGTGATTCTGGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETGKPATVVNKPGGAGIIGAAEV
SRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIFLDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQAL
PTAITFKAADQAGIKFSSNAPFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV
AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDNDFASAKELLNYMK

Sequences:

>Translated_313_residues
MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETGKPATVVNKPGGAGIIGAAEV
SRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIFLDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQAL
PTAITFKAADQAGIKFSSNAPFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV
AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDNDFASAKELLNYMK
>Mature_313_residues
MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETGKPATVVNKPGGAGIIGAAEV
SRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIFLDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQAL
PTAITFKAADQAGIKFSSNAPFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV
AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDNDFASAKELLNYMK

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33398; Mature: 33398

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
KPATVVNKPGGAGIIGAAEVSRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIF
CCCEEEECCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
LDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQALPTAITFKAADQAGIKFSSNA
EECCEEEEEECCCCHHHHHHHHHCCCCCCEEHHHHCHHHHCCEEEEECCCCCCCEECCCC
PFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCCHHHHCCC
AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDN
CEEECCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCHHHHHHHHH
DFASAKELLNYMK
HHHHHHHHHHHCC
>Mature Secondary Structure
MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
KPATVVNKPGGAGIIGAAEVSRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIF
CCCEEEECCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
LDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQALPTAITFKAADQAGIKFSSNA
EECCEEEEEECCCCHHHHHHHHHCCCCCCEEHHHHCHHHHCCEEEEECCCCCCCEECCCC
PFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCCHHHHCCC
AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDN
CEEECCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCHHHHHHHHH
DFASAKELLNYMK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3299368 [H]