| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679753
Identifier: 37679753
GI number: 37679753
Start: 1612980
End: 1613921
Strand: Direct
Name: 37679753
Synonym: VV1569
Alternate gene names: NA
Gene position: 1612980-1613921 (Clockwise)
Preceding gene: 37679752
Following gene: 37679754
Centisome position: 48.08
GC content: 48.51
Gene sequence:
>942_bases ATGATGAAAAGGACTAAACTGATTACTGCAATCGCACTTGCATCGATTTTTGCACCACTCACCAGTGTTGCTGCAGACTA CCCTAATCGCCCAGTAAAATACGTTGTGCCATGGCCTCCGGGTGATTTGGAAGACGTGCTGACTCGCCTAATTGCAGAAG AGATGGCGAAAGAAACAGGCAAGCCAGCCACAGTCGTTAACAAACCTGGTGGCGCCGGAATCATTGGTGCAGCAGAAGTT TCACGCGCGCGCCCAGATGGTCTGACGATCGGTTCGTTCGTTGCCGACATCCTCACCACGCACATTCTTTCTGGCAACGC ACCGTTTGACCAAACAACATTCGAGCCTGTTGGGATCTTCCTAGATTATCCGTTTGTGATTGCCGCAAAAGCAGATGCAC CATACAACAACCTAAAAGAGCTAGCTGATTACTCGCAAAGTAATCATGTTTCTCTGGCTCACTTTGGTTACCAAGCGCTG CCAACCGCGATCACGTTTAAAGCGGCTGACCAAGCTGGGATTAAGTTCTCGTCAAACGCACCGTTTGATGCGATCAACTG TTCGACCTTAGCTAACGGCGACGCGGATGTGGTCAATACCGTTACGCAAACCATCCTCTCTTGTTTGAAGTCTGGCGACG TGAAAATCATCGCTTCGATTACGCACGAACGTTTAAGCATCAGCCCAGATGTGCCAACGCTTAAAGAACAAACTGGCGTA GCACAAACAACGTGGAATGGCCTGTTTGTGAAGAAAGGCACACCTGACAACGTCAAACAAGTGATTGCAGATATCGCTCA AAAAGCGCTTAAGACCGACAAAGTGACGGCGATCAGCCAAAACACCGGTGCCAACGTTTTTTGGATGGGTGGCAAAGAAG CACAGCAAGTGATTGATAACGACTTTGCCAGTGCTAAAGAACTGCTGAACTACATGAAATAA
Upstream 100 bases:
>100_bases AACAAAGTACTGCAGAAAACCGAAGTACCCGTATTGATAGTACCCATAGCGAAAAAGTAGAAATGCTGGGCATCACCAGC TTCAGAGCACAAAAGGAATT
Downstream 100 bases:
>100_bases GTCCTTTGGGTGAGTAAACATATCTGGTTCATTTACTCACCCTTTTTTCAGGGAGTTGAACGCATATGACGATTGAAATC AACGAAGTGATTCTGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETGKPATVVNKPGGAGIIGAAEV SRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIFLDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQAL PTAITFKAADQAGIKFSSNAPFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDNDFASAKELLNYMK
Sequences:
>Translated_313_residues MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETGKPATVVNKPGGAGIIGAAEV SRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIFLDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQAL PTAITFKAADQAGIKFSSNAPFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDNDFASAKELLNYMK >Mature_313_residues MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETGKPATVVNKPGGAGIIGAAEV SRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIFLDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQAL PTAITFKAADQAGIKFSSNAPFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDNDFASAKELLNYMK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33398; Mature: 33398
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC KPATVVNKPGGAGIIGAAEVSRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIF CCCEEEECCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE LDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQALPTAITFKAADQAGIKFSSNA EECCEEEEEECCCCHHHHHHHHHCCCCCCEEHHHHCHHHHCCEEEEECCCCCCCEECCCC PFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCCHHHHCCC AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDN CEEECCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCHHHHHHHHH DFASAKELLNYMK HHHHHHHHHHHCC >Mature Secondary Structure MMKRTKLITAIALASIFAPLTSVAADYPNRPVKYVVPWPPGDLEDVLTRLIAEEMAKETG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC KPATVVNKPGGAGIIGAAEVSRARPDGLTIGSFVADILTTHILSGNAPFDQTTFEPVGIF CCCEEEECCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE LDYPFVIAAKADAPYNNLKELADYSQSNHVSLAHFGYQALPTAITFKAADQAGIKFSSNA EECCEEEEEECCCCHHHHHHHHHCCCCCCEEHHHHCHHHHCCEEEEECCCCCCCEECCCC PFDAINCSTLANGDADVVNTVTQTILSCLKSGDVKIIASITHERLSISPDVPTLKEQTGV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCCHHHHCCC AQTTWNGLFVKKGTPDNVKQVIADIAQKALKTDKVTAISQNTGANVFWMGGKEAQQVIDN CEEECCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCHHHHHHHHH DFASAKELLNYMK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]