| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679700
Identifier: 37679700
GI number: 37679700
Start: 1551153
End: 1552433
Strand: Direct
Name: 37679700
Synonym: VV1516
Alternate gene names: NA
Gene position: 1551153-1552433 (Clockwise)
Preceding gene: 37679689
Following gene: 37679701
Centisome position: 46.24
GC content: 46.84
Gene sequence:
>1281_bases TTGTCTTATTCTTTTATGGATAAAGATGCGTATGGAAGCAATACGATGAAAACAAAACTGTCAGTTGGTGTCATAGCGCT GTGCTTGCCTATGATGGCGCAAGCGATTGTGGCGGGTATCGATTCCAGTGAAAACTATGTGGTGAGTGTGGATGCCAGCT CGTTTGCTGAGCAATCCAGATGCGGAGGCACCATCATTAACTCGCGTTGGATCTTAACCGCGGCTCACTGCTTAATTCAG TCCAAATCGACTCAAGAAACGTCAACGGGGAACCCGGAATCATTTACCAACTATGACATTGTGGCGTTAAAAGAAGTGTC GCTCAGAGCGGGTATTCTCGATCTGTTTCAATCAGAGCTCAGTCATCGATATTCCGTCACGCACGTGGTGATTCACCCAG ATTACATGCCTTTGCGCACCACTAAGCAAACTGCGCAAGGTGAAGAGTTGGTGAGTACGGCATATCAACACGATCTCGCG CTGCTCAGAGTTGATAGGGATTTACCTGCGACGCCAGTAACTTTAGTTGATTCGGTGAGCTACCAAGATTTCATAACGAA AACCACGAAAGCTTGGGAAGATTGGGAAAACAGAGACCCCGCTAATACACCTCACGATGTGAAAGTACTAGGTTGGGGAA ATGATAGTCCCCTCTCTCCAATCATTGACAACACACCACCTATTTTGTTGAAGGAAACGGAAATCGTCTTGATGCCGATT TCAGATTGTTTTAATCACCTAGAAGCGGATCAAACTTTGCCAAGTTATATCGCTTCGAGCGGTGATTTGACCAAATTGTG CACATTGCCAAATCAAGAGTTTCATGCTGGAGACAAAAGTTATGGGAACGGTGCTTGTTTGGGGGATTCCGGTGGTCCGC TAGTATGGACTGATGGTGTTGGAAATCAATTTCAAGTGGGTATCATCAGTGCATCGCCTTTGATCAATACCGTTTGTAGC TCGGTCACTTATCCCACTTGGTATACCAATGTGGTGACCTATCTCGATTGGATAAGTGCTTACACTGATTCGGCAACACC CCCCGATCAGCAAATCACTAAACCCACGTTTATGATGACGGCTAGCCAAGAAACGCCAGATGACAGCACCTCAGAAAGTG GGGGCCAAACCAATGAGTGTTCGAGTAATACCTCTGCCAGTGTTGGCGGTGGAGAGGTTGGTCTAGGCTGTGCAGGATCG GAAAGTAGCGGCAGCGTCAATTGGGTTAGCCTTTTAGGTTTGTTGCTCTTTTGGCTAGCCCGTCGAAAAGCATGTGAATG A
Upstream 100 bases:
>100_bases TCGTTGTCGACGTTCTGCTTTCCTCAAGTTAACAAACTGATTACATAACAGACATTAATATTATGAAAAACAGTGATCTC AACAGGCGAATTTTCCAACC
Downstream 100 bases:
>100_bases ACGTCACCTATTCTTTTGCTTTGCTTGTTGATGAGTAAAGTGACCTCTTTCGTCGATGACATCAAAAATGATGTCATCGA ACGTCTTTTGTTATCACATA
Product: secreted trypsin-like serine protease
Products: NA
Alternate protein names: Serine Protease; Trypsin-Like Serine Protease; Trypsin Domain Protein; Serine Endopeptidase; Elastase
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSYSFMDKDAYGSNTMKTKLSVGVIALCLPMMAQAIVAGIDSSENYVVSVDASSFAEQSRCGGTIINSRWILTAAHCLIQ SKSTQETSTGNPESFTNYDIVALKEVSLRAGILDLFQSELSHRYSVTHVVIHPDYMPLRTTKQTAQGEELVSTAYQHDLA LLRVDRDLPATPVTLVDSVSYQDFITKTTKAWEDWENRDPANTPHDVKVLGWGNDSPLSPIIDNTPPILLKETEIVLMPI SDCFNHLEADQTLPSYIASSGDLTKLCTLPNQEFHAGDKSYGNGACLGDSGGPLVWTDGVGNQFQVGIISASPLINTVCS SVTYPTWYTNVVTYLDWISAYTDSATPPDQQITKPTFMMTASQETPDDSTSESGGQTNECSSNTSASVGGGEVGLGCAGS ESSGSVNWVSLLGLLLFWLARRKACE
Sequences:
>Translated_426_residues MSYSFMDKDAYGSNTMKTKLSVGVIALCLPMMAQAIVAGIDSSENYVVSVDASSFAEQSRCGGTIINSRWILTAAHCLIQ SKSTQETSTGNPESFTNYDIVALKEVSLRAGILDLFQSELSHRYSVTHVVIHPDYMPLRTTKQTAQGEELVSTAYQHDLA LLRVDRDLPATPVTLVDSVSYQDFITKTTKAWEDWENRDPANTPHDVKVLGWGNDSPLSPIIDNTPPILLKETEIVLMPI SDCFNHLEADQTLPSYIASSGDLTKLCTLPNQEFHAGDKSYGNGACLGDSGGPLVWTDGVGNQFQVGIISASPLINTVCS SVTYPTWYTNVVTYLDWISAYTDSATPPDQQITKPTFMMTASQETPDDSTSESGGQTNECSSNTSASVGGGEVGLGCAGS ESSGSVNWVSLLGLLLFWLARRKACE >Mature_425_residues SYSFMDKDAYGSNTMKTKLSVGVIALCLPMMAQAIVAGIDSSENYVVSVDASSFAEQSRCGGTIINSRWILTAAHCLIQS KSTQETSTGNPESFTNYDIVALKEVSLRAGILDLFQSELSHRYSVTHVVIHPDYMPLRTTKQTAQGEELVSTAYQHDLAL LRVDRDLPATPVTLVDSVSYQDFITKTTKAWEDWENRDPANTPHDVKVLGWGNDSPLSPIIDNTPPILLKETEIVLMPIS DCFNHLEADQTLPSYIASSGDLTKLCTLPNQEFHAGDKSYGNGACLGDSGGPLVWTDGVGNQFQVGIISASPLINTVCSS VTYPTWYTNVVTYLDWISAYTDSATPPDQQITKPTFMMTASQETPDDSTSESGGQTNECSSNTSASVGGGEVGLGCAGSE SSGSVNWVSLLGLLLFWLARRKACE
Specific function: Unknown
COG id: COG5640
COG function: function code O; Secreted trypsin-like serine protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24639096, Length=303, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46036; Mature: 45905
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00134 TRYPSIN_HIS ; PS00135 TRYPSIN_SER ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSFMDKDAYGSNTMKTKLSVGVIALCLPMMAQAIVAGIDSSENYVVSVDASSFAEQSR CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHH CGGTIINSRWILTAAHCLIQSKSTQETSTGNPESFTNYDIVALKEVSLRAGILDLFQSEL CCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH SHRYSVTHVVIHPDYMPLRTTKQTAQGEELVSTAYQHDLALLRVDRDLPATPVTLVDSVS HCCEEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHCCC YQDFITKTTKAWEDWENRDPANTPHDVKVLGWGNDSPLSPIIDNTPPILLKETEIVLMPI HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEH SDCFNHLEADQTLPSYIASSGDLTKLCTLPNQEFHAGDKSYGNGACLGDSGGPLVWTDGV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCCCEEECCCCCCEEEECCC GNQFQVGIISASPLINTVCSSVTYPTWYTNVVTYLDWISAYTDSATPPDQQITKPTFMMT CCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEE ASQETPDDSTSESGGQTNECSSNTSASVGGGEVGLGCAGSESSGSVNWVSLLGLLLFWLA ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH RRKACE HHHCCC >Mature Secondary Structure SYSFMDKDAYGSNTMKTKLSVGVIALCLPMMAQAIVAGIDSSENYVVSVDASSFAEQSR CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHH CGGTIINSRWILTAAHCLIQSKSTQETSTGNPESFTNYDIVALKEVSLRAGILDLFQSEL CCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH SHRYSVTHVVIHPDYMPLRTTKQTAQGEELVSTAYQHDLALLRVDRDLPATPVTLVDSVS HCCEEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHCCC YQDFITKTTKAWEDWENRDPANTPHDVKVLGWGNDSPLSPIIDNTPPILLKETEIVLMPI HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEH SDCFNHLEADQTLPSYIASSGDLTKLCTLPNQEFHAGDKSYGNGACLGDSGGPLVWTDGV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCCCEEECCCCCCEEEECCC GNQFQVGIISASPLINTVCSSVTYPTWYTNVVTYLDWISAYTDSATPPDQQITKPTFMMT CCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEE ASQETPDDSTSESGGQTNECSSNTSASVGGGEVGLGCAGSESSGSVNWVSLLGLLLFWLA ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH RRKACE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA