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The map label for this gene is pspC [H]

Identifier: 37679578

GI number: 37679578

Start: 1417189

End: 1417608

Strand: Direct

Name: pspC [H]

Synonym: VV1394

Alternate gene names: 37679578

Gene position: 1417189-1417608 (Clockwise)

Preceding gene: 37679577

Following gene: 37679579

Centisome position: 42.25

GC content: 45.71

Gene sequence:

>420_bases
ATGCGGAAAACCCCAATTGGAGACGTCGCTATGAATAGTCGAGAGCTCTACCGTGACCCAGTCAACGGCAAATTGAGTGG
TGTCTGCGCGGGTATTGCAAACTACTTGGCCATTGAAGTTTGGTTGATTCGGATCCTAGTGATTTCTGCGGCGCTGTTAG
GCGGAAGTTTTCTGGTTATTCTGGCGTACGTTGCCCTGACTTTTATGTTGGAAAAGCAACCAATCCAGTACCAAGAAGAT
TTAAAAATGCGCCATGACCATAAGCTCAAAGCCAAACCTTGGCAGCAAGGGCAAACGGCGGAATCCTTGTTGGCGATCCT
TGAAGCGGATTTCAATCGAATTGAAAACAAAGTGCGTGATATGGAAGCGTATGTCACTTCCGATACCTTCAAAGTGAACC
GTGAATTTAACAAACTTTAA

Upstream 100 bases:

>100_bases
GGTAGCGGTTTGTCGGACATAGATTTGCAGAAGTTGGAGTCTTTGTCCGGTCAAGCGGAAAAGCTTCAATCACGCATAGA
CACCTTGGAACGTATCCTCG

Downstream 100 bases:

>100_bases
GTTTGTTTTAGTAAAAATAACCCTTCTTGGGCAATTTTCATGAGAGCAAGGTTTAACCTTGCTCTCATTTTATTAAATTT
CAGATATTTACAAAGCTGTT

Product: phage shock protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRKTPIGDVAMNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFMLEKQPIQYQED
LKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTFKVNREFNKL

Sequences:

>Translated_139_residues
MRKTPIGDVAMNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFMLEKQPIQYQED
LKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTFKVNREFNKL
>Mature_139_residues
MRKTPIGDVAMNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFMLEKQPIQYQED
LKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTFKVNREFNKL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=129, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 15829; Mature: 15829

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTPIGDVAMNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVI
CCCCCCCHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LAYVALTFMLEKQPIQYQEDLKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRD
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MEAYVTSDTFKVNREFNKL
HHHHHHCCHHEECCHHCCC
>Mature Secondary Structure
MRKTPIGDVAMNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVI
CCCCCCCHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LAYVALTFMLEKQPIQYQEDLKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRD
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MEAYVTSDTFKVNREFNKL
HHHHHHCCHHEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]