Click here to switch to the map view.

The map label for this gene is 37679532

Identifier: 37679532

GI number: 37679532

Start: 1373877

End: 1375478

Strand: Direct

Name: 37679532

Synonym: VV1347

Alternate gene names: NA

Gene position: 1373877-1375478 (Clockwise)

Preceding gene: 37679529

Following gene: 37679533

Centisome position: 40.96

GC content: 44.88

Gene sequence:

>1602_bases
ATGAATTTAATAGATTTTGCTACATCTCCCATTTCACTTTTACCGCCGATAGTGGCACTGACGCTAGCCATTTTAACGCG
TAAAGTGCTTGTATCGCTTGGTGTCGGTATTCTTCTAGGTGCAGTGTTACTGAATGATTATTCGGTAGGCTCTGCGGCAG
CTTATATTACAGATAAAGTTTCAGCTGTTTTTATTGAAGATGGTGGCATCAATACTTGGAATATGAGTATTGTTGGTTTC
TTGTTGTTATTGGGCATGACCACCGCTCTACTGACTCTTTCTGGAGGCACTCGAGCTTTTGCTGAATGGGCACAGACTCG
AGTGAAAAGTAAGCGAGGTTCGAAATTACTCGCAGCGTTTTTAGGCGTATTCATTTTTGTAGACGACTATTTCAATAGCC
TAGCTGTGGGTGCGATTTCTCGCCCAGTAACGGACCGCTTTTATGTTTCACGCGCTAAACTTGCTTATATTCTAGACTCA
ACAGCAGCACCAATGTGTGTGGTGATGCCTGCATCGAGTTGGGGTGCGTACATCATGACCATTATTGGCGGTATTTTGGT
GTCACATGGCATCACTGAATATTCCGCATTAGGCGCATATCTACGTTTAGTACCGATGAACTTCTACGCGATTTTCGCCT
TGTTAATGGTGTTTGCGGTCGCTTGGTTTGGTTTAGACATTGGTAAAATGCGTGAACATGAAATTGCTGCCTCACAAGGC
CGTGGTTTTGACAATGACGCTGATACTGACCTAAAAGAAGCGCATGAAATTGACGAAGAGCTTGATATCCGTGAAAGCGA
TAAAGGTAAAGTGACCGATCTTGTTATGCCGATCATTGCTTTGATTATTGCAACGGTTGCTTCAATGCTCTATACCGGTG
GCCAAGCACTTGCGGCCGATGGTAAAGCTTTCGACTTGCTTGGTGCATTCGAAAATACCAACGTAGGTACATCGCTTATT
TATGGTGGTCTGGTTGGTTTGGCTGTGGCCTTGTTCACCGTGTTCAAACAAGGTCTTCCAGTTGCAGAAATTGCTCGCAC
TTTATGGATCGGTGCTAAATCGATGTTTGGTGCAATCCTTATTCTGATTTTCGCCTGGACTATCGGTTCGGTTATTGGCG
ACATGAAAACGGGTAGCTACTTGTCTACCATGGCACAAGGCAATATTAACCCTCATTGGCTACCTGTGATTCTATTCCTG
CTTTCTGGTTTGATGGCGTTTTCTACCGGAACATCGTGGGGCACGTTTGGTATTATGCTACCTATCGCGGGTGACATGGC
GGGTGCGACAGATATCGCTCTTATGCTTCCTATGCTAAGTGCAGTATTAGCGGGTTCTGTTTTTGGTGATCACTGTTCAC
CGATTTCTGATACGACGATTCTTTCTTCAACGGGCGCTCGTTGTCATCATATTGACCACGTAGCGACTCAGTTACCTTAT
GCACTTGCAGTGGCGTTGGTTTCTTGTATTGGTTTCGTTGTATTGGGTATGACCGCTTCCGTTATGTTCTCACTAGCGGC
TGCAACCATGGCATTCATCATCGTTTGTGCAATCCTCTCTTGGTTGTCAAAAGCAAAGATTGAGTCTTGCCAACAAGCGT
AA

Upstream 100 bases:

>100_bases
AAGTGTTCACTTCCCTGTCGCTTAGTTCAACATAAGTAACGGACATCCTGTTTACTTTGTCTGCAGTAGATCTCTAGCCA
AACTTTGGTTTTTGAAGATC

Downstream 100 bases:

>100_bases
TATCTTAATTTATATAAACTTTGAAAGGGTAGCTTCGGCTACCCTTTTTATTTGTCTTATACAAATTGATATTTTTTAAA
ATAAAGTGTTGCAAAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MNLIDFATSPISLLPPIVALTLAILTRKVLVSLGVGILLGAVLLNDYSVGSAAAYITDKVSAVFIEDGGINTWNMSIVGF
LLLLGMTTALLTLSGGTRAFAEWAQTRVKSKRGSKLLAAFLGVFIFVDDYFNSLAVGAISRPVTDRFYVSRAKLAYILDS
TAAPMCVVMPASSWGAYIMTIIGGILVSHGITEYSALGAYLRLVPMNFYAIFALLMVFAVAWFGLDIGKMREHEIAASQG
RGFDNDADTDLKEAHEIDEELDIRESDKGKVTDLVMPIIALIIATVASMLYTGGQALAADGKAFDLLGAFENTNVGTSLI
YGGLVGLAVALFTVFKQGLPVAEIARTLWIGAKSMFGAILILIFAWTIGSVIGDMKTGSYLSTMAQGNINPHWLPVILFL
LSGLMAFSTGTSWGTFGIMLPIAGDMAGATDIALMLPMLSAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY
ALAVALVSCIGFVVLGMTASVMFSLAAATMAFIIVCAILSWLSKAKIESCQQA

Sequences:

>Translated_533_residues
MNLIDFATSPISLLPPIVALTLAILTRKVLVSLGVGILLGAVLLNDYSVGSAAAYITDKVSAVFIEDGGINTWNMSIVGF
LLLLGMTTALLTLSGGTRAFAEWAQTRVKSKRGSKLLAAFLGVFIFVDDYFNSLAVGAISRPVTDRFYVSRAKLAYILDS
TAAPMCVVMPASSWGAYIMTIIGGILVSHGITEYSALGAYLRLVPMNFYAIFALLMVFAVAWFGLDIGKMREHEIAASQG
RGFDNDADTDLKEAHEIDEELDIRESDKGKVTDLVMPIIALIIATVASMLYTGGQALAADGKAFDLLGAFENTNVGTSLI
YGGLVGLAVALFTVFKQGLPVAEIARTLWIGAKSMFGAILILIFAWTIGSVIGDMKTGSYLSTMAQGNINPHWLPVILFL
LSGLMAFSTGTSWGTFGIMLPIAGDMAGATDIALMLPMLSAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY
ALAVALVSCIGFVVLGMTASVMFSLAAATMAFIIVCAILSWLSKAKIESCQQA
>Mature_533_residues
MNLIDFATSPISLLPPIVALTLAILTRKVLVSLGVGILLGAVLLNDYSVGSAAAYITDKVSAVFIEDGGINTWNMSIVGF
LLLLGMTTALLTLSGGTRAFAEWAQTRVKSKRGSKLLAAFLGVFIFVDDYFNSLAVGAISRPVTDRFYVSRAKLAYILDS
TAAPMCVVMPASSWGAYIMTIIGGILVSHGITEYSALGAYLRLVPMNFYAIFALLMVFAVAWFGLDIGKMREHEIAASQG
RGFDNDADTDLKEAHEIDEELDIRESDKGKVTDLVMPIIALIIATVASMLYTGGQALAADGKAFDLLGAFENTNVGTSLI
YGGLVGLAVALFTVFKQGLPVAEIARTLWIGAKSMFGAILILIFAWTIGSVIGDMKTGSYLSTMAQGNINPHWLPVILFL
LSGLMAFSTGTSWGTFGIMLPIAGDMAGATDIALMLPMLSAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY
ALAVALVSCIGFVVLGMTASVMFSLAAATMAFIIVCAILSWLSKAKIESCQQA

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 56369; Mature: 56369

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIDFATSPISLLPPIVALTLAILTRKVLVSLGVGILLGAVLLNDYSVGSAAAYITDKV
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
SAVFIEDGGINTWNMSIVGFLLLLGMTTALLTLSGGTRAFAEWAQTRVKSKRGSKLLAAF
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
LGVFIFVDDYFNSLAVGAISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH
IIGGILVSHGITEYSALGAYLRLVPMNFYAIFALLMVFAVAWFGLDIGKMREHEIAASQG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
RGFDNDADTDLKEAHEIDEELDIRESDKGKVTDLVMPIIALIIATVASMLYTGGQALAAD
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
GKAFDLLGAFENTNVGTSLIYGGLVGLAVALFTVFKQGLPVAEIARTLWIGAKSMFGAIL
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ILIFAWTIGSVIGDMKTGSYLSTMAQGNINPHWLPVILFLLSGLMAFSTGTSWGTFGIML
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEE
PIAGDMAGATDIALMLPMLSAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ALAVALVSCIGFVVLGMTASVMFSLAAATMAFIIVCAILSWLSKAKIESCQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLIDFATSPISLLPPIVALTLAILTRKVLVSLGVGILLGAVLLNDYSVGSAAAYITDKV
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
SAVFIEDGGINTWNMSIVGFLLLLGMTTALLTLSGGTRAFAEWAQTRVKSKRGSKLLAAF
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
LGVFIFVDDYFNSLAVGAISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH
IIGGILVSHGITEYSALGAYLRLVPMNFYAIFALLMVFAVAWFGLDIGKMREHEIAASQG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
RGFDNDADTDLKEAHEIDEELDIRESDKGKVTDLVMPIIALIIATVASMLYTGGQALAAD
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
GKAFDLLGAFENTNVGTSLIYGGLVGLAVALFTVFKQGLPVAEIARTLWIGAKSMFGAIL
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ILIFAWTIGSVIGDMKTGSYLSTMAQGNINPHWLPVILFLLSGLMAFSTGTSWGTFGIML
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEE
PIAGDMAGATDIALMLPMLSAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ALAVALVSCIGFVVLGMTASVMFSLAAATMAFIIVCAILSWLSKAKIESCQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]