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The map label for this gene is yejB [H]

Identifier: 37679490

GI number: 37679490

Start: 1326821

End: 1327843

Strand: Direct

Name: yejB [H]

Synonym: VV1306

Alternate gene names: 37679490

Gene position: 1326821-1327843 (Clockwise)

Preceding gene: 37679489

Following gene: 37679491

Centisome position: 39.55

GC content: 40.37

Gene sequence:

>1023_bases
GTGTTATCTTATATCCTCAGACGTATGGCGTTAATCGTGCCGACGTTTCTTGGCATTACCATCTTAATTTTTGCCATTAC
CCGTTTTGTGCCTGGTGGCCCTGTAGAGCGTATGCTGGCAAGCATGCATTCTGGCAGTGATAGCGCTACGGTCAGTGTCG
CTGGTAACAATTCGGCCCTTTCCGAAGATCAAATGGCAGAGCTAAACGCTTTCTACGGTTTAGATAAACCAGTTGTTGAA
GCTTATTGGGATTGGTTGACTCGTCTTCTTGTCTTAGATTTCGGTGAATCCACACGCTATTATGAGCCTGTTGGGACTAT
GATCGCAGAGCGTCTTCCTGTTTCCTTATTTTATGGCGGCATGACGTTTTTTATCAGTTATTTTATTTCCATACCCTTAG
GTTATTACAAAGCTATAAAGCACGGTTCTGTTTTTGACTCCGCATCCTCGATAATGATTTTTGTTGGTTATGCTTTGCCT
GGTTATGTTGTTGGCGTATTTTTGATCACCGTTTTTGCCTATAACCTTGAATGGTTTCCTATGGGTGGTTTTGTCGGCGA
TGACTTTGACGACTATGAAACCTTCTGGCTTCAATTTAAAGATATTATGTGGCACGCAGTCTTGCCGCTTATTTGTTATT
TGATTGGCGACTTTGCGACGTTAACAATGACGATGAAGAATAGTTTAATGGAAAACCTTTCTTCAGATTATATCCGTACC
GCGATTTCTAAAGGGCTGCCTTTTAAAAAAGCAGTAAAAAAGCATGCTTTGCAAAATAGCTTAATTCCAATCGCAAGTCA
TTTTGGTAATTCTCTATTGTTCTTTATGACAGGTTCATTTTTGATCGAAGTTATTTTTAATATCGATGGTATAGGGCTTC
TTGGTTACGAATCTATTATTGAGCGTGATTACCCCGTTGTAATGGGTATTGTTGCTATTAATGCTGTTATGTTGATGGTG
GGCAATATTCTTTCAGATCTTTGTGTGGCATTAACTGACCCACGAGTAAGGTTTGGTGCCTGA

Upstream 100 bases:

>100_bases
CTTTTGTGATTATATATCATCAGAAATTATCGTTTGGCCGCAACAAGGTCGTTGTGGTCTTAAGGCAATCAATTTGTCAC
AGCATGGAGTTAGAGCGTAG

Downstream 100 bases:

>100_bases
TGTTTACTGTAAGCCCATTAACTCAAAAGAAAATTAAGGCGTTCAAGAATATTAAACGTGGCTATTGGTCATTTATTGTT
CTCGCTACTTTACTGGTTCT

Product: ABC-type uncharacterized transport system, permease component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLSYILRRMALIVPTFLGITILIFAITRFVPGGPVERMLASMHSGSDSATVSVAGNNSALSEDQMAELNAFYGLDKPVVE
AYWDWLTRLLVLDFGESTRYYEPVGTMIAERLPVSLFYGGMTFFISYFISIPLGYYKAIKHGSVFDSASSIMIFVGYALP
GYVVGVFLITVFAYNLEWFPMGGFVGDDFDDYETFWLQFKDIMWHAVLPLICYLIGDFATLTMTMKNSLMENLSSDYIRT
AISKGLPFKKAVKKHALQNSLIPIASHFGNSLLFFMTGSFLIEVIFNIDGIGLLGYESIIERDYPVVMGIVAINAVMLMV
GNILSDLCVALTDPRVRFGA

Sequences:

>Translated_340_residues
MLSYILRRMALIVPTFLGITILIFAITRFVPGGPVERMLASMHSGSDSATVSVAGNNSALSEDQMAELNAFYGLDKPVVE
AYWDWLTRLLVLDFGESTRYYEPVGTMIAERLPVSLFYGGMTFFISYFISIPLGYYKAIKHGSVFDSASSIMIFVGYALP
GYVVGVFLITVFAYNLEWFPMGGFVGDDFDDYETFWLQFKDIMWHAVLPLICYLIGDFATLTMTMKNSLMENLSSDYIRT
AISKGLPFKKAVKKHALQNSLIPIASHFGNSLLFFMTGSFLIEVIFNIDGIGLLGYESIIERDYPVVMGIVAINAVMLMV
GNILSDLCVALTDPRVRFGA
>Mature_340_residues
MLSYILRRMALIVPTFLGITILIFAITRFVPGGPVERMLASMHSGSDSATVSVAGNNSALSEDQMAELNAFYGLDKPVVE
AYWDWLTRLLVLDFGESTRYYEPVGTMIAERLPVSLFYGGMTFFISYFISIPLGYYKAIKHGSVFDSASSIMIFVGYALP
GYVVGVFLITVFAYNLEWFPMGGFVGDDFDDYETFWLQFKDIMWHAVLPLICYLIGDFATLTMTMKNSLMENLSSDYIRT
AISKGLPFKKAVKKHALQNSLIPIASHFGNSLLFFMTGSFLIEVIFNIDGIGLLGYESIIERDYPVVMGIVAINAVMLMV
GNILSDLCVALTDPRVRFGA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=36.0881542699724, Blast_Score=225, Evalue=4e-60,
Organism=Escherichia coli, GI1789965, Length=352, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-45,
Organism=Escherichia coli, GI1787497, Length=339, Percent_Identity=28.6135693215339, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI1789888, Length=338, Percent_Identity=27.2189349112426, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1787053, Length=339, Percent_Identity=26.2536873156342, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787761, Length=352, Percent_Identity=28.125, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=22.6765799256506, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37863; Mature: 37863

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYILRRMALIVPTFLGITILIFAITRFVPGGPVERMLASMHSGSDSATVSVAGNNSAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC
SEDQMAELNAFYGLDKPVVEAYWDWLTRLLVLDFGESTRYYEPVGTMIAERLPVSLFYGG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHH
MTFFISYFISIPLGYYKAIKHGSVFDSASSIMIFVGYALPGYVVGVFLITVFAYNLEWFP
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
MGGFVGDDFDDYETFWLQFKDIMWHAVLPLICYLIGDFATLTMTMKNSLMENLSSDYIRT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISKGLPFKKAVKKHALQNSLIPIASHFGNSLLFFMTGSFLIEVIFNIDGIGLLGYESII
HHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ERDYPVVMGIVAINAVMLMVGNILSDLCVALTDPRVRFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLSYILRRMALIVPTFLGITILIFAITRFVPGGPVERMLASMHSGSDSATVSVAGNNSAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC
SEDQMAELNAFYGLDKPVVEAYWDWLTRLLVLDFGESTRYYEPVGTMIAERLPVSLFYGG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHH
MTFFISYFISIPLGYYKAIKHGSVFDSASSIMIFVGYALPGYVVGVFLITVFAYNLEWFP
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
MGGFVGDDFDDYETFWLQFKDIMWHAVLPLICYLIGDFATLTMTMKNSLMENLSSDYIRT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISKGLPFKKAVKKHALQNSLIPIASHFGNSLLFFMTGSFLIEVIFNIDGIGLLGYESII
HHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ERDYPVVMGIVAINAVMLMVGNILSDLCVALTDPRVRFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]