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The map label for this gene is yciS [H]

Identifier: 37679486

GI number: 37679486

Start: 1324044

End: 1324310

Strand: Direct

Name: yciS [H]

Synonym: VV1302

Alternate gene names: 37679486

Gene position: 1324044-1324310 (Clockwise)

Preceding gene: 37679485

Following gene: 37679487

Centisome position: 39.47

GC content: 38.58

Gene sequence:

>267_bases
ATGAAAATTATAAAAATCATTGCTGTAATAGCTCTCTTTCTTATTGCACTGGCGTTAGGTTCTCAGAATCAAGAAGTTGT
TACTTTCAACTACTTACTGGCAAAAGGGGATTTTCATTTGTCCACTTTGCTGGGCGGTGTGTTTGTCGCAGGCTTTGCAT
TGGCGTGGGCTATTTTTGCTAGCTTGCAGTTTAAGATGCGATTAAAAATCAGAAAGCTAAACAAACAGATCAAAAAGCAA
AGCACACAGGTCGAAAAACAAGCGTAA

Upstream 100 bases:

>100_bases
TATGCCGCTTTTTTATCGTCAGATAATTGTTATTATCCGTGGTCGGCAGGTGGGTTTTCCTGCATAATTGTATCGGCTGA
TATCTTCAAGGTGATGACAG

Downstream 100 bases:

>100_bases
GGGCGAATCGGTTTAATGCTTGAATTACTCTTCTTGTTACTTCCTATTGCCGCTGCGTATGGTTGGTATATGGGCCATCG
CAGCGCACAGGATGACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKIIKIIAVIALFLIALALGSQNQEVVTFNYLLAKGDFHLSTLLGGVFVAGFALAWAIFASLQFKMRLKIRKLNKQIKKQ
STQVEKQA

Sequences:

>Translated_88_residues
MKIIKIIAVIALFLIALALGSQNQEVVTFNYLLAKGDFHLSTLLGGVFVAGFALAWAIFASLQFKMRLKIRKLNKQIKKQ
STQVEKQA
>Mature_88_residues
MKIIKIIAVIALFLIALALGSQNQEVVTFNYLLAKGDFHLSTLLGGVFVAGFALAWAIFASLQFKMRLKIRKLNKQIKKQ
STQVEKQA

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=78, Percent_Identity=41.025641025641, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 9807; Mature: 9807

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKIIAVIALFLIALALGSQNQEVVTFNYLLAKGDFHLSTLLGGVFVAGFALAWAIFA
CHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SLQFKMRLKIRKLNKQIKKQSTQVEKQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIIKIIAVIALFLIALALGSQNQEVVTFNYLLAKGDFHLSTLLGGVFVAGFALAWAIFA
CHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SLQFKMRLKIRKLNKQIKKQSTQVEKQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]