| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is fabH1 [H]
Identifier: 37679457
GI number: 37679457
Start: 1293895
End: 1294845
Strand: Direct
Name: fabH1 [H]
Synonym: VV1273
Alternate gene names: 37679457
Gene position: 1293895-1294845 (Clockwise)
Preceding gene: 161486634
Following gene: 37679458
Centisome position: 38.57
GC content: 47.42
Gene sequence:
>951_bases ATGTATAGCAAAATTTTAGGTACTGGCAGCTACCTGCCATCTCAGATCCGCACCAATGCCGATCTAGAGAAAATGGTAGA GACAAGTGATGAGTGGATTGTTGCCCGAACTGGTATTAAAGAGCGTCGTATTGCTGCTGAAAATGAAACGGTAGCTGATA TGGGTTTTTATGCGGCTCAAAACGCGATAGAGATGGCAGGTATCGACAAAAATGATATTGACCTGATCATCGTCGCGACG ACAAGTGGAAGCCATACTTTTCCTTCATCTGCATGTCAGGTGCAGGCAAAGCTTGGCATCAAAGGTTGTCCTGCATTCGA TTTAGCTGCTGCGTGCTCTGGCTTTGTCTACGCACTTTCTATTGCTGATCAACATATTAAAACGGGTATGTGTAAAAACG TACTGGTTATTGGCTCCGATACTTTATCGAAAACTTGTGATCCAACGGACCGCTCGACCATTATCTTATTCGGTGATGGT GCCGGTGCTGTGGTTGTTGGAGCAAGCGAAGAGCCGGGTATTCTGTCTACTCACATCTACGCGGATGGTGAGTTTGGCGA TCTTCTTAGCTTAGAAGTACCTGAGCGCGGCAAAGATGCCGACAAATGGTTACACATGGCGGGTAACGAAGTATTCAAAG TAGCGGTGACTCAGTTATCGAAACTGGTGAAAGATACTCTAGAAGCGAACGGCATGCATAAATCTGAGTTGGATTGGTTA GTTCCACATCAGGCGAACTACCGGATCATCTCAGCGACGGCGAAAAAACTGTCTATGTCGCTCGATCAAGTGGTGATTAC CCTTGATCGTCATGGCAATACCTCTGCGGCAACCGTACCGACGGCATTAGATGAGGCCGTGCGTGATGGGCGTATTCAGC GTGGTCAGACGCTACTACTAGAAGCCTTTGGTGGCGGTTTCACCTGGGGTTCGGCATTAGTTCGCTTTTAA
Upstream 100 bases:
>100_bases ATGCGATTGGTGAGGCGGTACACGAGGTCAAACGACAAGTACCAAGCCGTATAAGCGATCGTTTGGAAGCGGTTTTACTC GAGAGGCATTATTAGTCTTC
Downstream 100 bases:
>100_bases TTAAGAATTCTAATTTTGCTGTTGCTCGTGAGTAGTAACAGCATTTTATTTAGCTTCGGTTAAGGAAAATTACTATGAGC AAGTTTGCTATCGTATTTCC
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III protein 1; Beta-ketoacyl-ACP synthase III 1; KAS III 1 [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MYSKILGTGSYLPSQIRTNADLEKMVETSDEWIVARTGIKERRIAAENETVADMGFYAAQNAIEMAGIDKNDIDLIIVAT TSGSHTFPSSACQVQAKLGIKGCPAFDLAAACSGFVYALSIADQHIKTGMCKNVLVIGSDTLSKTCDPTDRSTIILFGDG AGAVVVGASEEPGILSTHIYADGEFGDLLSLEVPERGKDADKWLHMAGNEVFKVAVTQLSKLVKDTLEANGMHKSELDWL VPHQANYRIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQTLLLEAFGGGFTWGSALVRF
Sequences:
>Translated_316_residues MYSKILGTGSYLPSQIRTNADLEKMVETSDEWIVARTGIKERRIAAENETVADMGFYAAQNAIEMAGIDKNDIDLIIVAT TSGSHTFPSSACQVQAKLGIKGCPAFDLAAACSGFVYALSIADQHIKTGMCKNVLVIGSDTLSKTCDPTDRSTIILFGDG AGAVVVGASEEPGILSTHIYADGEFGDLLSLEVPERGKDADKWLHMAGNEVFKVAVTQLSKLVKDTLEANGMHKSELDWL VPHQANYRIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQTLLLEAFGGGFTWGSALVRF >Mature_316_residues MYSKILGTGSYLPSQIRTNADLEKMVETSDEWIVARTGIKERRIAAENETVADMGFYAAQNAIEMAGIDKNDIDLIIVAT TSGSHTFPSSACQVQAKLGIKGCPAFDLAAACSGFVYALSIADQHIKTGMCKNVLVIGSDTLSKTCDPTDRSTIILFGDG AGAVVVGASEEPGILSTHIYADGEFGDLLSLEVPERGKDADKWLHMAGNEVFKVAVTQLSKLVKDTLEANGMHKSELDWL VPHQANYRIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQTLLLEAFGGGFTWGSALVRF
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=317, Percent_Identity=71.9242902208202, Blast_Score=483, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 33857; Mature: 33857
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSKILGTGSYLPSQIRTNADLEKMVETSDEWIVARTGIKERRIAAENETVADMGFYAAQ CCCCEECCCCCCCHHHCCCCCHHHHHCCCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHC NAIEMAGIDKNDIDLIIVATTSGSHTFPSSACQVQAKLGIKGCPAFDLAAACSGFVYALS CHHEECCCCCCCCEEEEEEECCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHCCCEEEEE IADQHIKTGMCKNVLVIGSDTLSKTCDPTDRSTIILFGDGAGAVVVGASEEPGILSTHIY HHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEE ADGEFGDLLSLEVPERGKDADKWLHMAGNEVFKVAVTQLSKLVKDTLEANGMHKSELDWL ECCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE VPHQANYRIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQTLLL CCCCCCCEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE EAFGGGFTWGSALVRF EECCCCCCHHHHHHCC >Mature Secondary Structure MYSKILGTGSYLPSQIRTNADLEKMVETSDEWIVARTGIKERRIAAENETVADMGFYAAQ CCCCEECCCCCCCHHHCCCCCHHHHHCCCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHC NAIEMAGIDKNDIDLIIVATTSGSHTFPSSACQVQAKLGIKGCPAFDLAAACSGFVYALS CHHEECCCCCCCCEEEEEEECCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHCCCEEEEE IADQHIKTGMCKNVLVIGSDTLSKTCDPTDRSTIILFGDGAGAVVVGASEEPGILSTHIY HHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEE ADGEFGDLLSLEVPERGKDADKWLHMAGNEVFKVAVTQLSKLVKDTLEANGMHKSELDWL ECCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE VPHQANYRIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQTLLL CCCCCCCEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE EAFGGGFTWGSALVRF EECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]