| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679353
Identifier: 37679353
GI number: 37679353
Start: 1183862
End: 1185073
Strand: Direct
Name: 37679353
Synonym: VV1169
Alternate gene names: NA
Gene position: 1183862-1185073 (Clockwise)
Preceding gene: 37679352
Following gene: 37679355
Centisome position: 35.29
GC content: 47.03
Gene sequence:
>1212_bases GTGGTTATAGTAATGACTCGCTCAACGATGGTCGCTTTTTACAAAAGTTTTTGTTTGCCTGTTTTGGTGCTAATGAGTTT GTCGGGATGCTCGTTATTAGAGGTGAAGCTGGATAGCCAAGTCACCCCGTTGACTCAGCAAGAGCTGAATACTCGTTTAC ATACGCGTGAATACGCATTGCAATTTTTTACCCAAGTCGAGCAAACGGCGGATACGCTTAAAAGTGGCTATCCTGCGACG GATACTCTGCACCAGTCCTATATTTTGTTGTGGAAAATCAATGCAGAGGAAGGTCTAGCACGGGCTGCGTATCAGGTTTC ACCCACTGCGGCGCTGATCGACAGTTGGGTTTTTACTCAGCAGATGACAGACTATTTTTCTCAAGGGCCGGGTCGCGAGC AGTTTGAATCGACTCTCGCCTCAGATGCATCACAAGCTTTACTGACACAAGTGGAACAGTTGGCGAGTGCTCTATTGAAG AACAGTTCGTACAAGAGCAGCCAGCAATTTGTTCGCGAGTTTGCCACGCAACACCCATTTACCGATCTCAAATTTAATCC CACACCAGCTTACCGCGCTTGGCTAAAAGCCAATGATATTAATGAAGATGAGGCGATAACCACGCTAGGCACCATGCCGG AAGCTTTAGGCGATGTCTCTGATCGCCTCAGTTTGATTTCAGAGCAAACGCCGAAGATCATGAGTTGGAAAGCGGAGCTT ATTGCCCTTAATAGCAGCATCAGTGGCGAAGATTTGTCACAAACCTTGGCCTCCATGAAGGCCACTTCTGAGGCCTTTCA AGATTTCGTGAAGAATAACCCAGAATACATGAAGAACTTGGCGGAGCAGATGGCCATAGAGTTGCAGCCGCTGGTGGCTG ATATTGACCAAAAAACCTCGCGTCAGATGAGTAAACTCGATGAACAAAGGGCGGCGTTGGAAGCCATGGTTGCACGCGAG AGGGTTGAGCTGTTTGCGATGATAGAGCGTGAAAGAGAAGCGTTGAATAAGATGGTGACGCAAGAACGAGTGAGCTTTAC TCAAGACATGGATAAGCTCTCACAAGATGTGGTCGCGCTGGCGATGGATAAGTTGGTTGAGCTGATCAAAAGCGTGATTA TTTACTTTGTTCTGTTTATCGCTGTAATTTTCTTTGCTCCGCTTGGCTTAGGTTATGCACTCGGAAAGAGAGCACAAAGA AAGAGCAATTAG
Upstream 100 bases:
>100_bases CGCGCAACGCATTCTCAATCGCGAGATTGTCATCTCATCATAAGATGCTGATATTTCTCTGACTTATACTGGTTATATTC GTCATCCTTTTCTTTTTGTA
Downstream 100 bases:
>100_bases CCAAAGGGCTGGCCGTTGGCGCAACGAATGCAGCTGAACGACAACAAAAAAGCGTAGCTCGAGGGCTACGCTTTTTTATT GAGTGGCGGAGGTTAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MVIVMTRSTMVAFYKSFCLPVLVLMSLSGCSLLEVKLDSQVTPLTQQELNTRLHTREYALQFFTQVEQTADTLKSGYPAT DTLHQSYILLWKINAEEGLARAAYQVSPTAALIDSWVFTQQMTDYFSQGPGREQFESTLASDASQALLTQVEQLASALLK NSSYKSSQQFVREFATQHPFTDLKFNPTPAYRAWLKANDINEDEAITTLGTMPEALGDVSDRLSLISEQTPKIMSWKAEL IALNSSISGEDLSQTLASMKATSEAFQDFVKNNPEYMKNLAEQMAIELQPLVADIDQKTSRQMSKLDEQRAALEAMVARE RVELFAMIEREREALNKMVTQERVSFTQDMDKLSQDVVALAMDKLVELIKSVIIYFVLFIAVIFFAPLGLGYALGKRAQR KSN
Sequences:
>Translated_403_residues MVIVMTRSTMVAFYKSFCLPVLVLMSLSGCSLLEVKLDSQVTPLTQQELNTRLHTREYALQFFTQVEQTADTLKSGYPAT DTLHQSYILLWKINAEEGLARAAYQVSPTAALIDSWVFTQQMTDYFSQGPGREQFESTLASDASQALLTQVEQLASALLK NSSYKSSQQFVREFATQHPFTDLKFNPTPAYRAWLKANDINEDEAITTLGTMPEALGDVSDRLSLISEQTPKIMSWKAEL IALNSSISGEDLSQTLASMKATSEAFQDFVKNNPEYMKNLAEQMAIELQPLVADIDQKTSRQMSKLDEQRAALEAMVARE RVELFAMIEREREALNKMVTQERVSFTQDMDKLSQDVVALAMDKLVELIKSVIIYFVLFIAVIFFAPLGLGYALGKRAQR KSN >Mature_403_residues MVIVMTRSTMVAFYKSFCLPVLVLMSLSGCSLLEVKLDSQVTPLTQQELNTRLHTREYALQFFTQVEQTADTLKSGYPAT DTLHQSYILLWKINAEEGLARAAYQVSPTAALIDSWVFTQQMTDYFSQGPGREQFESTLASDASQALLTQVEQLASALLK NSSYKSSQQFVREFATQHPFTDLKFNPTPAYRAWLKANDINEDEAITTLGTMPEALGDVSDRLSLISEQTPKIMSWKAEL IALNSSISGEDLSQTLASMKATSEAFQDFVKNNPEYMKNLAEQMAIELQPLVADIDQKTSRQMSKLDEQRAALEAMVARE RVELFAMIEREREALNKMVTQERVSFTQDMDKLSQDVVALAMDKLVELIKSVIIYFVLFIAVIFFAPLGLGYALGKRAQR KSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45307; Mature: 45307
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIVMTRSTMVAFYKSFCLPVLVLMSLSGCSLLEVKLDSQVTPLTQQELNTRLHTREYAL CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH QFFTQVEQTADTLKSGYPATDTLHQSYILLWKINAEEGLARAAYQVSPTAALIDSWVFTQ HHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHH QMTDYFSQGPGREQFESTLASDASQALLTQVEQLASALLKNSSYKSSQQFVREFATQHPF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC TDLKFNPTPAYRAWLKANDINEDEAITTLGTMPEALGDVSDRLSLISEQTPKIMSWKAEL CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH IALNSSISGEDLSQTLASMKATSEAFQDFVKNNPEYMKNLAEQMAIELQPLVADIDQKTS HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQMSKLDEQRAALEAMVARERVELFAMIEREREALNKMVTQERVSFTQDMDKLSQDVVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDKLVELIKSVIIYFVLFIAVIFFAPLGLGYALGKRAQRKSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVIVMTRSTMVAFYKSFCLPVLVLMSLSGCSLLEVKLDSQVTPLTQQELNTRLHTREYAL CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH QFFTQVEQTADTLKSGYPATDTLHQSYILLWKINAEEGLARAAYQVSPTAALIDSWVFTQ HHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHH QMTDYFSQGPGREQFESTLASDASQALLTQVEQLASALLKNSSYKSSQQFVREFATQHPF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC TDLKFNPTPAYRAWLKANDINEDEAITTLGTMPEALGDVSDRLSLISEQTPKIMSWKAEL CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH IALNSSISGEDLSQTLASMKATSEAFQDFVKNNPEYMKNLAEQMAIELQPLVADIDQKTS HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQMSKLDEQRAALEAMVARERVELFAMIEREREALNKMVTQERVSFTQDMDKLSQDVVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDKLVELIKSVIIYFVLFIAVIFFAPLGLGYALGKRAQRKSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA