Click here to switch to the map view.

The map label for this gene is dctP [H]

Identifier: 37679280

GI number: 37679280

Start: 1099558

End: 1101066

Strand: Direct

Name: dctP [H]

Synonym: VV1096

Alternate gene names: 37679280

Gene position: 1099558-1101066 (Clockwise)

Preceding gene: 37679279

Following gene: 37679281

Centisome position: 32.78

GC content: 47.18

Gene sequence:

>1509_bases
GTGTCCTCTATCGTGGCGATGCACATTATCACGGTGTCGCTACGGCATGATCGGGGGAGAATGATCAAACCAAGCTTGCG
GTTTGATGTGAGGGCACGCCTTTCTTATGACTTCTTTTCTACGCTTATCGGTCTTGATGCTCCTTTCCTTCTGTCAGAGA
CGCTTTCTTGTAATTGGTGTTCCTACTATCGATTTTCCTGCTATCGGTTTCCCTACTATCAGCTTTCCAGTCATCCGTTT
TTCGACAATCCGTTTGTCTTGCTTGCCATTCGAGCTCTAAAGACAGGCGGCACACCCAAAGCGTTTGATACGAATGTGTC
ACTTTCCACCCTTTTGTTCTTAATAGATGTGTCATTTCCCACCCATTTTAAACGCTGCAACGGGGTGGTTTTCATGGCTT
GTTATCTTATCTATTTGAATTTTATTTGTTTTTACTTTTGGTCTGGTTATTGCTCTAACAGAAACATCGCACCCAAAGAT
GGGGCGGTTCGATTAACAAGGAGAAGAATAATGTTAAAGCCTCTAACCCTACTTGCTGCTTCCGTACTTGCTGTCACCAG
TTTCAATGCGGCGGCCAACTGTGACCCAGGCGAGATCGTCATCAAGTTCAGCCACGTCACCAATACCGATAAGCACCCGA
AAGGGATCGCGGCATCACTACTGGAAAAACGCGTGAACGAAGAGATGAACGGCAAAGCGTGTATGCAGGTTTACCCAAAC
TCAACACTGTACGATGACGACAAAGTGTTAGAAGCCATGCTAAACGGCGATGTTCAATTGGCGGCCCCTTCTCTTTCCAA
GTTTGAAAAATTCACCAAGAAATATCGCATCTTTGACCTGCCATTCCTGTTTGAAGACGTCGACGCGGTTGACCGTTTCC
AAAACTCAGATGCGGGCGTGAAGTTGAAAAATGCCATGAATCGTCGTGGTGTGCGTGGGTTAGAGTTCTGGCACAACGGC
ATGAAGCAAATTTCAGCCAGCAAGCCACTGATTTCGCCAGCGGACGCCAAAGGATTGAAATTCCGCGTGCAAGCGTCTGA
TGTGTTGGTTGCTCAGTTTGAACAACTGGGTGCGAACCCACAAAAAATGTCGTTTGCTGAAGTGTACGGCGGGCTGCAAA
CCAAGGTTATTGATGGTCAGGAAAACACTTGGTCTAACATCTACGGTAAGAAATTCTTTGAAGTACAGGATGGTATTACT
GAAACCAACCACGGCATTTTGGATTACCTAGTCGTGACCTCAAGCAAGTGGTGGGATGGCCTGCCTGCGGATGTGCGTGA
CCAGTTCGCGACCATCCTAAAAGAAGTGACAGAGCAACGTAACGCTGAGTCCAACAAGGTTGAGTTAGCCAACAAGCAGT
ACGTGATTGAAGCGGGTGGTGTGGTGCGCACCTTGACGCCAGAGCAACGTGAAGCGTGGGTAACGGCGTTGAAACCTGTT
TGGAAGAAATTTGAGAAAGACATCGGTTCAGATCTGATTGATGCAGCATTGGCGTCAAACAAACAATAA

Upstream 100 bases:

>100_bases
ATTTTGATGCCGAATCACAACAACGAATAGAGTTTCACTGATGAGGTAGGGTGAAACCCACAAGGGCGAAGCGTGTAAGG
CGCGTTAGCCCATTATTTGC

Downstream 100 bases:

>100_bases
ATAAGAACGGGCTCTGACGGTCGAGTCAGAGCCCAGTTTTTAGCACAATAATGAGCGAATCGATTATGGAACAATCACTT
TTGGCAAAAATTGGTCACTT

Product: TRAP-type C4-dicarboxylate transport system, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MSSIVAMHIITVSLRHDRGRMIKPSLRFDVRARLSYDFFSTLIGLDAPFLLSETLSCNWCSYYRFSCYRFPYYQLSSHPF
FDNPFVLLAIRALKTGGTPKAFDTNVSLSTLLFLIDVSFPTHFKRCNGVVFMACYLIYLNFICFYFWSGYCSNRNIAPKD
GAVRLTRRRIMLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPN
STLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGVKLKNAMNRRGVRGLEFWHNG
MKQISASKPLISPADAKGLKFRVQASDVLVAQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGIT
ETNHGILDYLVVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPV
WKKFEKDIGSDLIDAALASNKQ

Sequences:

>Translated_502_residues
MSSIVAMHIITVSLRHDRGRMIKPSLRFDVRARLSYDFFSTLIGLDAPFLLSETLSCNWCSYYRFSCYRFPYYQLSSHPF
FDNPFVLLAIRALKTGGTPKAFDTNVSLSTLLFLIDVSFPTHFKRCNGVVFMACYLIYLNFICFYFWSGYCSNRNIAPKD
GAVRLTRRRIMLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPN
STLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGVKLKNAMNRRGVRGLEFWHNG
MKQISASKPLISPADAKGLKFRVQASDVLVAQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGIT
ETNHGILDYLVVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPV
WKKFEKDIGSDLIDAALASNKQ
>Mature_501_residues
SSIVAMHIITVSLRHDRGRMIKPSLRFDVRARLSYDFFSTLIGLDAPFLLSETLSCNWCSYYRFSCYRFPYYQLSSHPFF
DNPFVLLAIRALKTGGTPKAFDTNVSLSTLLFLIDVSFPTHFKRCNGVVFMACYLIYLNFICFYFWSGYCSNRNIAPKDG
AVRLTRRRIMLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPNS
TLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGVKLKNAMNRRGVRGLEFWHNGM
KQISASKPLISPADAKGLKFRVQASDVLVAQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITE
TNHGILDYLVVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPVW
KKFEKDIGSDLIDAALASNKQ

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=288, Percent_Identity=31.5972222222222, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 56694; Mature: 56563

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIVAMHIITVSLRHDRGRMIKPSLRFDVRARLSYDFFSTLIGLDAPFLLSETLSCNWC
CCCEEEEEEEEEEEECCCCCEECCCCCEEEHHHCCHHHHHHHHHCCCCHHHHHCCCCCCH
SYYRFSCYRFPYYQLSSHPFFDNPFVLLAIRALKTGGTPKAFDTNVSLSTLLFLIDVSFP
HHHCEEEEECCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCCEECCCHHHHEEHHHCCCCC
THFKRCNGVVFMACYLIYLNFICFYFWSGYCSNRNIAPKDGAVRLTRRRIMLKPLTLLAA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPN
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC
STLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGV
CCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCE
KLKNAMNRRGVRGLEFWHNGMKQISASKPLISPADAKGLKFRVQASDVLVAQFEQLGANP
EHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
QKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYLVVTSSKWWDG
CCCHHHHHHCCCEEEEECCCCCCCHHHHCCHHEEHHCCCCCCCCCCEEEEEEECCCCCCC
LPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPV
CCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEECCCHHHHHHHHHHHHH
WKKFEKDIGSDLIDAALASNKQ
HHHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure 
SSIVAMHIITVSLRHDRGRMIKPSLRFDVRARLSYDFFSTLIGLDAPFLLSETLSCNWC
CCEEEEEEEEEEEECCCCCEECCCCCEEEHHHCCHHHHHHHHHCCCCHHHHHCCCCCCH
SYYRFSCYRFPYYQLSSHPFFDNPFVLLAIRALKTGGTPKAFDTNVSLSTLLFLIDVSFP
HHHCEEEEECCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCCEECCCHHHHEEHHHCCCCC
THFKRCNGVVFMACYLIYLNFICFYFWSGYCSNRNIAPKDGAVRLTRRRIMLKPLTLLAA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPN
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC
STLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGV
CCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCE
KLKNAMNRRGVRGLEFWHNGMKQISASKPLISPADAKGLKFRVQASDVLVAQFEQLGANP
EHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
QKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYLVVTSSKWWDG
CCCHHHHHHCCCEEEEECCCCCCCHHHHCCHHEEHHCCCCCCCCCCEEEEEEECCCCCCC
LPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPV
CCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEECCCHHHHHHHHHHHHH
WKKFEKDIGSDLIDAALASNKQ
HHHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]