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The map label for this gene is ugpA [C]

Identifier: 37679277

GI number: 37679277

Start: 1096600

End: 1097523

Strand: Direct

Name: ugpA [C]

Synonym: VV1093

Alternate gene names: 37679277

Gene position: 1096600-1097523 (Clockwise)

Preceding gene: 37679276

Following gene: 37679278

Centisome position: 32.69

GC content: 49.24

Gene sequence:

>924_bases
ATGGAGCATATTTTGAGTGGGCCAACGAGCAAAATCGCACCAAAACCTTCGCTAGCTGATCGCTTGCAACACTGGTTACC
GAAACTGGTGTTAGCGCCGACCATGCTAGTGACGGTGGTGTGTATCTACGGATTTATTTTTTGGACAGCGGCGCTTTCCA
TGACTAACTCCCGTTTTCTACCCAGTTTTAAGTTTGTTGGTTTTGACCAATATGCCAAATTGATGGAAAACGACCGCTGG
GTAACGTCGATTACTAACCTAGGTATTTTTGGCGTTCTTTTCATTGCGATTGCCATCGTCTTGGGTGTCGGTCTGGCCAT
TTTGTTGGATCAAAACATCCGTCAGGAAGGGGCAATTCGCACCATTTACCTCTATCCCATGGCGCTGTCCTTCATTGTGA
CTGGTACGGCGTGGAAGTGGATTTTGAACCCAGGATTGGGGATAGAAAAACTGTTGAACGACTGGGGATGGACCACCTTT
AAATTTGACTGGTTGGTGAACTCGGAGATGTCGGTTTACACCTTAGTGATTGCTGCGGTTTGGCAATCGTCCGGTTTTGT
TATGGCGATGTTTCTCGCGGGTTTGCGTGGTATTGATTCCTCGATCATCAAGGCGGCGCAAATTGATGGCGCGAGCCTAC
CGACCATCTATTGGAAAATCATTCTGCCGTGTTTGCGTCCGGTGTTTTTTAGCGCGGTGATCATCACTTCGCACATCGCG
ATTAAGAGTTTCGACTTGGTCACCGCGATGACCGCTGGTGGACCGGGCTATTCATCGGATTTACCTGCGCTCTTTATGTA
CGCACACTCGTTTACTCGCGGGCAAATCGGTTTAGGTGCCGCCAGTGCGATGATGATGTTAGGGGGCATTCTGGCCATCT
TGGTGCCGTATCTTTATTCCGAGCTTAGGGAGAAGCGCGCATGA

Upstream 100 bases:

>100_bases
TAGGCGGGCAGGCGCTCTTTGCCTGTCTGCCTATCTCAGCTGATCTTCTCACTCTGAGCGTTTGCTCGGAAGGAAGTGTT
TTTCGCTACAAGGAATCGTT

Downstream 100 bases:

>100_bases
ACTCTTCAGTGAACATGGCCCGATGGTTTATTTACGGCGCATTGGTCTTTTTCTGCTTGGTCTATTTGATGCCGTTGTTT
GTCATGGTGATCACCTCGTT

Product: ABC-type sugar transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEHILSGPTSKIAPKPSLADRLQHWLPKLVLAPTMLVTVVCIYGFIFWTAALSMTNSRFLPSFKFVGFDQYAKLMENDRW
VTSITNLGIFGVLFIAIAIVLGVGLAILLDQNIRQEGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLLNDWGWTTF
KFDWLVNSEMSVYTLVIAAVWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYWKIILPCLRPVFFSAVIITSHIA
IKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLGGILAILVPYLYSELREKRA

Sequences:

>Translated_307_residues
MEHILSGPTSKIAPKPSLADRLQHWLPKLVLAPTMLVTVVCIYGFIFWTAALSMTNSRFLPSFKFVGFDQYAKLMENDRW
VTSITNLGIFGVLFIAIAIVLGVGLAILLDQNIRQEGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLLNDWGWTTF
KFDWLVNSEMSVYTLVIAAVWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYWKIILPCLRPVFFSAVIITSHIA
IKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLGGILAILVPYLYSELREKRA
>Mature_307_residues
MEHILSGPTSKIAPKPSLADRLQHWLPKLVLAPTMLVTVVCIYGFIFWTAALSMTNSRFLPSFKFVGFDQYAKLMENDRW
VTSITNLGIFGVLFIAIAIVLGVGLAILLDQNIRQEGAIRTIYLYPMALSFIVTGTAWKWILNPGLGIEKLLNDWGWTTF
KFDWLVNSEMSVYTLVIAAVWQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYWKIILPCLRPVFFSAVIITSHIA
IKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLGGILAILVPYLYSELREKRA

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=303, Percent_Identity=28.0528052805281, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=24.5762711864407, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33848; Mature: 33848

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHILSGPTSKIAPKPSLADRLQHWLPKLVLAPTMLVTVVCIYGFIFWTAALSMTNSRFL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSFKFVGFDQYAKLMENDRWVTSITNLGIFGVLFIAIAIVLGVGLAILLDQNIRQEGAIR
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEE
TIYLYPMALSFIVTGTAWKWILNPGLGIEKLLNDWGWTTFKFDWLVNSEMSVYTLVIAAV
EEEHHHHHHHHHHHCCHHEEHCCCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHH
WQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYWKIILPCLRPVFFSAVIITSHIA
HCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLGGILAILVPYLYS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ELREKRA
HHHHHCC
>Mature Secondary Structure
MEHILSGPTSKIAPKPSLADRLQHWLPKLVLAPTMLVTVVCIYGFIFWTAALSMTNSRFL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSFKFVGFDQYAKLMENDRWVTSITNLGIFGVLFIAIAIVLGVGLAILLDQNIRQEGAIR
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEE
TIYLYPMALSFIVTGTAWKWILNPGLGIEKLLNDWGWTTFKFDWLVNSEMSVYTLVIAAV
EEEHHHHHHHHHHHCCHHEEHCCCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHH
WQSSGFVMAMFLAGLRGIDSSIIKAAQIDGASLPTIYWKIILPCLRPVFFSAVIITSHIA
HCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKSFDLVTAMTAGGPGYSSDLPALFMYAHSFTRGQIGLGAASAMMMLGGILAILVPYLYS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ELREKRA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]