| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679269
Identifier: 37679269
GI number: 37679269
Start: 1084636
End: 1085892
Strand: Direct
Name: 37679269
Synonym: VV1085
Alternate gene names: NA
Gene position: 1084636-1085892 (Clockwise)
Preceding gene: 37679268
Following gene: 37679270
Centisome position: 32.33
GC content: 49.96
Gene sequence:
>1257_bases ATGGAAAAGCAATCCACCCAGGTTGTCATTATTGGTGCGGGTCCTTCGGGCTCGACCGCCTCTGCGTTGCTACATCAGCG TGGCATCAAAGTCATTGTGTTAGAAAAAGCGCAATTTCCCCGCTTTTCGATTGGGGAGAGTTTGCTGCCGGCTTGTATGG AAGTGGTTGAACAGGCGGGCATGTTAGACGCCGTGAATCAGCATGGTTTTCAATTTAAAAATGGTGCAGCCTTTCGCAAG CAAGGTGTCTATACCGAGTTCGACTTTACCGATAAGTTTACGCCCGGCCCTGGCACGACCTTTCAAGTACAAAGAGCGAC GTTCGATAAAGTGTTGGCAGATGATGCGCAGCGCCAAGGGGTAGAGATTCGTTACCAGCATGAAGTAACGGAAGTGACCT TTGAGGGCAGCAAGTCACGGCTTGTGGTGACGGACGAACACGGTCAAGCCTATCAAATTGAAGCCGATTATTTACTCGAT GCCAGTGGGTTTGGACGAGTGTTGCCAAAATTGCTGGCCTTGGAAGAGCCTTCTTGTTTACCTCCGAGGAAAGCCATTTT TACTCACATCGTCGATAATATCGATGGCGATGGCATCGCTTATACCCGCGATAAGATCTTGATTTCGGTTCATCCTGAAA ACGCCGATGTCTGGTATTGGTTGATACCGTTTTCCAATGGTGTTTGCTCTTTTGGCGTGGTTGGCACTCCAGAGTTTTTC CAAAATTATCCAGACGATAAGTTAGCAGCGCTCCAGCAACTGGCGTCAGAAGAACCGGGGCTCGCTCAACTGCTGAATAA GGCGCAATATCCGAATCCTGCTGGCGAATTAGGCGGCTACTCGGCCAACGTTAAGCACTTAGCAACACCACATTATGCGT TGCTAGGCAATGCGGGTGAGTTTCTTGATCCGGTGTTCTCTTCCGGTGTCACGATTGCGATGAAATCGGCGCAGTTTGTC GTAGAGTGCGTTGAGAAACAGTTGGCTGGCGAAGTGGTCGATTGGCAAAAAGCGTATGCCGAACCTTTGATGGTCGGGGT GAATACCTTCCGCACCTATGTTGAAGGTTGGTATGACGGCACTTTGCAAGAGGTGATTTTCTTTGACGATCCGAACCCGC GCATCAAGCAGATGATCTCTTCGATTCTTGCTGGTTACGCGTGGGATGAGAGTAACCCTTATGTCAAAGAATCGAGACGC CGACTGGCAAGCTTAGCGGAGTTTGTTCGCGAGCTGCGCACTGAAACAGCGCTTTGA
Upstream 100 bases:
>100_bases CGGACTTGAGGTTGTGGAGCGTACCGACAATATCGGATTAGGCCACACTTTGCTCAAATTGGTTGCAAAACAATAAAGAA AATCAGGAATTACACTGAGT
Downstream 100 bases:
>100_bases ACGGAATCATCTGCACGCTAAGGAGAAGAAAGAGATCGTCTTTTTAGCCTAAATAGCGAGTAAATGGAAAAGGCCCATCA GGGCCTTTTTCTTTATCTTT
Product: putative oxidoreductase protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Halogenase; Oxidoreductase Protein; Oxidoreductase; Dehydrogenase; Geranylgeranyl Reductase; FADH2 Dependent Halogenase; Electron Transfer Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; LOW QUALITY PROTEIN Dehydrogenase; Monooxygenase; Dehydrogenases; Halogenase Protein; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; Halogenase A; FAD Oxidoreductase; Hydroxylase; Geranylgeranyl Reductase Plantal And; Alkylhalidase CmlS; Geranylgeranyl Reductase Family Protein; Fad Dependent Oxidoreductase; Alkylhalidase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MEKQSTQVVIIGAGPSGSTASALLHQRGIKVIVLEKAQFPRFSIGESLLPACMEVVEQAGMLDAVNQHGFQFKNGAAFRK QGVYTEFDFTDKFTPGPGTTFQVQRATFDKVLADDAQRQGVEIRYQHEVTEVTFEGSKSRLVVTDEHGQAYQIEADYLLD ASGFGRVLPKLLALEEPSCLPPRKAIFTHIVDNIDGDGIAYTRDKILISVHPENADVWYWLIPFSNGVCSFGVVGTPEFF QNYPDDKLAALQQLASEEPGLAQLLNKAQYPNPAGELGGYSANVKHLATPHYALLGNAGEFLDPVFSSGVTIAMKSAQFV VECVEKQLAGEVVDWQKAYAEPLMVGVNTFRTYVEGWYDGTLQEVIFFDDPNPRIKQMISSILAGYAWDESNPYVKESRR RLASLAEFVRELRTETAL
Sequences:
>Translated_418_residues MEKQSTQVVIIGAGPSGSTASALLHQRGIKVIVLEKAQFPRFSIGESLLPACMEVVEQAGMLDAVNQHGFQFKNGAAFRK QGVYTEFDFTDKFTPGPGTTFQVQRATFDKVLADDAQRQGVEIRYQHEVTEVTFEGSKSRLVVTDEHGQAYQIEADYLLD ASGFGRVLPKLLALEEPSCLPPRKAIFTHIVDNIDGDGIAYTRDKILISVHPENADVWYWLIPFSNGVCSFGVVGTPEFF QNYPDDKLAALQQLASEEPGLAQLLNKAQYPNPAGELGGYSANVKHLATPHYALLGNAGEFLDPVFSSGVTIAMKSAQFV VECVEKQLAGEVVDWQKAYAEPLMVGVNTFRTYVEGWYDGTLQEVIFFDDPNPRIKQMISSILAGYAWDESNPYVKESRR RLASLAEFVRELRTETAL >Mature_418_residues MEKQSTQVVIIGAGPSGSTASALLHQRGIKVIVLEKAQFPRFSIGESLLPACMEVVEQAGMLDAVNQHGFQFKNGAAFRK QGVYTEFDFTDKFTPGPGTTFQVQRATFDKVLADDAQRQGVEIRYQHEVTEVTFEGSKSRLVVTDEHGQAYQIEADYLLD ASGFGRVLPKLLALEEPSCLPPRKAIFTHIVDNIDGDGIAYTRDKILISVHPENADVWYWLIPFSNGVCSFGVVGTPEFF QNYPDDKLAALQQLASEEPGLAQLLNKAQYPNPAGELGGYSANVKHLATPHYALLGNAGEFLDPVFSSGVTIAMKSAQFV VECVEKQLAGEVVDWQKAYAEPLMVGVNTFRTYVEGWYDGTLQEVIFFDDPNPRIKQMISSILAGYAWDESNPYVKESRR RLASLAEFVRELRTETAL
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46248; Mature: 46248
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQSTQVVIIGAGPSGSTASALLHQRGIKVIVLEKAQFPRFSIGESLLPACMEVVEQAG CCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC MLDAVNQHGFQFKNGAAFRKQGVYTEFDFTDKFTPGPGTTFQVQRATFDKVLADDAQRQG HHHHHHHCCCEECCCCCHHHCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC VEIRYQHEVTEVTFEGSKSRLVVTDEHGQAYQIEADYLLDASGFGRVLPKLLALEEPSCL CEEEEEEEEEEEEECCCCCEEEEECCCCCEEEEECCEEECCCCHHHHHHHHHHCCCCCCC PPRKAIFTHIVDNIDGDGIAYTRDKILISVHPENADVWYWLIPFSNGVCSFGVVGTPEFF CHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCEEEEEEECCCCCEECCCCCCHHHH QNYPDDKLAALQQLASEEPGLAQLLNKAQYPNPAGELGGYSANVKHLATPHYALLGNAGE HCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHCCCCCCCCHHCCCCCEEEECCCHH FLDPVFSSGVTIAMKSAQFVVECVEKQLAGEVVDWQKAYAEPLMVGVNTFRTYVEGWYDG HHHHHHHCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC TLQEVIFFDDPNPRIKQMISSILAGYAWDESNPYVKESRRRLASLAEFVRELRTETAL CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKQSTQVVIIGAGPSGSTASALLHQRGIKVIVLEKAQFPRFSIGESLLPACMEVVEQAG CCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC MLDAVNQHGFQFKNGAAFRKQGVYTEFDFTDKFTPGPGTTFQVQRATFDKVLADDAQRQG HHHHHHHCCCEECCCCCHHHCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC VEIRYQHEVTEVTFEGSKSRLVVTDEHGQAYQIEADYLLDASGFGRVLPKLLALEEPSCL CEEEEEEEEEEEEECCCCCEEEEECCCCCEEEEECCEEECCCCHHHHHHHHHHCCCCCCC PPRKAIFTHIVDNIDGDGIAYTRDKILISVHPENADVWYWLIPFSNGVCSFGVVGTPEFF CHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCEEEEEEECCCCCEECCCCCCHHHH QNYPDDKLAALQQLASEEPGLAQLLNKAQYPNPAGELGGYSANVKHLATPHYALLGNAGE HCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHCCCCCCCCHHCCCCCEEEECCCHH FLDPVFSSGVTIAMKSAQFVVECVEKQLAGEVVDWQKAYAEPLMVGVNTFRTYVEGWYDG HHHHHHHCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC TLQEVIFFDDPNPRIKQMISSILAGYAWDESNPYVKESRRRLASLAEFVRELRTETAL CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA