| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is mltB [H]
Identifier: 37679243
GI number: 37679243
Start: 1060750
End: 1061721
Strand: Direct
Name: mltB [H]
Synonym: VV1059
Alternate gene names: 37679243
Gene position: 1060750-1061721 (Clockwise)
Preceding gene: 37679242
Following gene: 37679244
Centisome position: 31.62
GC content: 48.15
Gene sequence:
>972_bases TTGAAAAAATTGGTAACCGCGATACTCAGCATCGGACTTTGTTCATCGGCGTGGGCGAACACTGAAAGTTTTGAGCAGTA TCTTGAGCGTTTAAAAGCCCAAGCGGCAGAAGAAGGCATTTCGGCTCAAACCATAGAGCAAGCCTTTCGCGATGTGCAAT TTAAGCCACGAGCGGTAAAAGCCGATCGCAACCAACCGGAGAAAAAACAAACGCTGGATGAATATCTTCCTCGTGCGGTG CCCGATTGGAAAGTGAAACAAGCCAAAGATCTCTATGCAAAGCATTACGCTGAATTGAGCCAGATTGCGGATCGCTATGG CGTACAAGCGCGCTTTATTGTCGCGTTGTGGGGCGTTGAGAGTAACTTTGGTAAGTTCACCGGCAATTTCCCTGTGGTCG ATGCTTTATCAACCATGGCCTATGAAGGGCGTCGTGAAGCCTTCTTTCGTGCCGAAACCATGGCTGCGCTGAAAATCTTA GACCAAGGGCATATTGAGTTTGAAAACTTCAAAGGCTCTTGGGCAGGCGCGATGGGCCAGTGTCAGTTTATGCCAAGCTC TTTCCTTGCCTATGCGGCAGACGGTAACGGTGATGGCAAGAAAGACATCTGGAATACCAAAGCCGATGTGTTTGCTTCAA CAGCCAGTTACCTCAGCCAATCGGGTTGGGATGATAAATACACTTGGGGTCGCCAAGTACGCGTGCCGAAAGGGTTTGAT CTTGAGCTAGAAGGGCGAGAAGAGGCGAAAGGCAAATACCTGCAGGAATGGAAAAAACTGGGTATTACCAGCATCAATGG ACGCCCATTACCTAAGCTAAACGAAGACATTAAAGCTTGGTTAGTGATGCCCGATGATGAAAATGGCCGCGCTTATCTGG TCTACAACAACTACAATGTGTTGATGAAGTGGAATCGCTCGCATTACTTTGCACTGGCAGTGAGCCATTTGGCTGACCGC ATCAAAAATTAA
Upstream 100 bases:
>100_bases ATCTATTACAACAACATAAAGAGCGTAAAGCGCAGCAGAAAAACGACTAAGGCGTGATTGCCCTGAGTTAAAGTCAGCTC GATTGCTCAAGGAGGGCTAT
Downstream 100 bases:
>100_bases TTCAATTCGGCTTGTGGTGTTAGCCACAAGCCAACAGCGATAAACATGTTATCTGAACGCGCAGCACAAATGGTGGTTTT TGCCGCCCTCGTCAAACATC
Product: membrane-bound lytic murein transglycosylase B
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKKLVTAILSIGLCSSAWANTESFEQYLERLKAQAAEEGISAQTIEQAFRDVQFKPRAVKADRNQPEKKQTLDEYLPRAV PDWKVKQAKDLYAKHYAELSQIADRYGVQARFIVALWGVESNFGKFTGNFPVVDALSTMAYEGRREAFFRAETMAALKIL DQGHIEFENFKGSWAGAMGQCQFMPSSFLAYAADGNGDGKKDIWNTKADVFASTASYLSQSGWDDKYTWGRQVRVPKGFD LELEGREEAKGKYLQEWKKLGITSINGRPLPKLNEDIKAWLVMPDDENGRAYLVYNNYNVLMKWNRSHYFALAVSHLADR IKN
Sequences:
>Translated_323_residues MKKLVTAILSIGLCSSAWANTESFEQYLERLKAQAAEEGISAQTIEQAFRDVQFKPRAVKADRNQPEKKQTLDEYLPRAV PDWKVKQAKDLYAKHYAELSQIADRYGVQARFIVALWGVESNFGKFTGNFPVVDALSTMAYEGRREAFFRAETMAALKIL DQGHIEFENFKGSWAGAMGQCQFMPSSFLAYAADGNGDGKKDIWNTKADVFASTASYLSQSGWDDKYTWGRQVRVPKGFD LELEGREEAKGKYLQEWKKLGITSINGRPLPKLNEDIKAWLVMPDDENGRAYLVYNNYNVLMKWNRSHYFALAVSHLADR IKN >Mature_323_residues MKKLVTAILSIGLCSSAWANTESFEQYLERLKAQAAEEGISAQTIEQAFRDVQFKPRAVKADRNQPEKKQTLDEYLPRAV PDWKVKQAKDLYAKHYAELSQIADRYGVQARFIVALWGVESNFGKFTGNFPVVDALSTMAYEGRREAFFRAETMAALKIL DQGHIEFENFKGSWAGAMGQCQFMPSSFLAYAADGNGDGKKDIWNTKADVFASTASYLSQSGWDDKYTWGRQVRVPKGFD LELEGREEAKGKYLQEWKKLGITSINGRPLPKLNEDIKAWLVMPDDENGRAYLVYNNYNVLMKWNRSHYFALAVSHLADR IKN
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=224, Percent_Identity=31.6964285714286, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 36732; Mature: 36732
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVTAILSIGLCSSAWANTESFEQYLERLKAQAAEEGISAQTIEQAFRDVQFKPRAVK CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEC ADRNQPEKKQTLDEYLPRAVPDWKVKQAKDLYAKHYAELSQIADRYGVQARFIVALWGVE CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC SNFGKFTGNFPVVDALSTMAYEGRREAFFRAETMAALKILDQGHIEFENFKGSWAGAMGQ CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCE CQFMPSSFLAYAADGNGDGKKDIWNTKADVFASTASYLSQSGWDDKYTWGRQVRVPKGFD EEECCCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC LELEGREEAKGKYLQEWKKLGITSINGRPLPKLNEDIKAWLVMPDDENGRAYLVYNNYNV EEECCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEE LMKWNRSHYFALAVSHLADRIKN EEEECCCEEHHHHHHHHHHHHCC >Mature Secondary Structure MKKLVTAILSIGLCSSAWANTESFEQYLERLKAQAAEEGISAQTIEQAFRDVQFKPRAVK CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEC ADRNQPEKKQTLDEYLPRAVPDWKVKQAKDLYAKHYAELSQIADRYGVQARFIVALWGVE CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC SNFGKFTGNFPVVDALSTMAYEGRREAFFRAETMAALKILDQGHIEFENFKGSWAGAMGQ CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCE CQFMPSSFLAYAADGNGDGKKDIWNTKADVFASTASYLSQSGWDDKYTWGRQVRVPKGFD EEECCCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC LELEGREEAKGKYLQEWKKLGITSINGRPLPKLNEDIKAWLVMPDDENGRAYLVYNNYNV EEECCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEE LMKWNRSHYFALAVSHLADRIKN EEEECCCEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]