| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679236
Identifier: 37679236
GI number: 37679236
Start: 1054520
End: 1055374
Strand: Direct
Name: 37679236
Synonym: VV1052
Alternate gene names: NA
Gene position: 1054520-1055374 (Clockwise)
Preceding gene: 37679235
Following gene: 37679237
Centisome position: 31.44
GC content: 45.73
Gene sequence:
>855_bases ATGCGTGAGACGCGTTATGTTATCGCTAGTGGAACGCTGGCAGCAATCGAGTATGGTGATGTAAAAACGGCTGATTTATC AGTCGTTTTTCTTCATGGCTGGTTGGATAACGCCGCCAGCTTTCATCGTGTCATGGCAGAGCTGCATCAGAAAAACCCTA AGCTTCACCTATGCGCCATTGATCTCCCCGGTCATGGTCTCTCTTCGCACAAGTCATTGGATAATTTTTATCCATTTCAT GATTATATCGATGACGTTTATCAGTTTTTGCGTGTTTTATCGCCAAATAAACTGCTACTAGTAGGCCATTCACTTGGTGC TTTGATTGCAAGTTGTTATAGTGCGGCCTTTCCTGAACAGGTGACAGCTCTGGTTCAGATAGAAGGTTACGGGCCTTTGG CTGAAGCCCCGCAAAAGGCGGTTGAAAGGCTCAGGCAAGGGGTACTCAGCCGTAATCGTTTGCGTGCGAAACCCTCCCGT AATCTCAGTAGTTTTGATGAAGCGCTCATGCTTCGCGTCGCTGCCAATCAGCTTTCTGCGGATGCATTGCGACCCATCGT CGAACGTGGTGTTGAACATCGCCATGGCATTTGGCAATGGCGTCATGATGCAAAACTGAAATGTGATTCGTTGTATCGAC TCTCGCAGAAACATGCCGAAACGATTTTAGACCAAATTTCCTGTTTTCATCTGATCATATTAGGCGAAAATGGATTTCGT GAGCTTAAGGATATCAGTCACTTAAATGCGAAAAATCCAGCCCAAATTGAGACAGTACAAGGCGGTCATCACTGTCACTT AGAGCAATCACTCGAGGTCGCAATGCGAATTCTTGGGGTAGTTAACAAAATTTAA
Upstream 100 bases:
>100_bases TGTATGACACTTCAAGCTACCTCTACCCGTGTTATTCGATTACTTGCCGACAAATGCGCGACTTCCCGCGTGACGGTAAA ATCATTCAAGATGTTAAATA
Downstream 100 bases:
>100_bases ACAAGTGTTTGAGAGTTTCGTGCTCAAGCATGCCTGCTGTGCTGTAATAGTGAACAAATAAAAAGGACGCTATCTCGCAA GCTTCTCTTGCGTAGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold Protein; Hydrolase/Acyltransferase; Lipase A; Lipase; Beta-Ketoacyl Synthase; Hydrolase Protein; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Family Protein; Lipase LipA; Hydrolase Alpha/Beta Fold Family Protein; Epoxide Hydrolase; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Fold Hydrolase Family Protein; Polyketide Synthase
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRETRYVIASGTLAAIEYGDVKTADLSVVFLHGWLDNAASFHRVMAELHQKNPKLHLCAIDLPGHGLSSHKSLDNFYPFH DYIDDVYQFLRVLSPNKLLLVGHSLGALIASCYSAAFPEQVTALVQIEGYGPLAEAPQKAVERLRQGVLSRNRLRAKPSR NLSSFDEALMLRVAANQLSADALRPIVERGVEHRHGIWQWRHDAKLKCDSLYRLSQKHAETILDQISCFHLIILGENGFR ELKDISHLNAKNPAQIETVQGGHHCHLEQSLEVAMRILGVVNKI
Sequences:
>Translated_284_residues MRETRYVIASGTLAAIEYGDVKTADLSVVFLHGWLDNAASFHRVMAELHQKNPKLHLCAIDLPGHGLSSHKSLDNFYPFH DYIDDVYQFLRVLSPNKLLLVGHSLGALIASCYSAAFPEQVTALVQIEGYGPLAEAPQKAVERLRQGVLSRNRLRAKPSR NLSSFDEALMLRVAANQLSADALRPIVERGVEHRHGIWQWRHDAKLKCDSLYRLSQKHAETILDQISCFHLIILGENGFR ELKDISHLNAKNPAQIETVQGGHHCHLEQSLEVAMRILGVVNKI >Mature_284_residues MRETRYVIASGTLAAIEYGDVKTADLSVVFLHGWLDNAASFHRVMAELHQKNPKLHLCAIDLPGHGLSSHKSLDNFYPFH DYIDDVYQFLRVLSPNKLLLVGHSLGALIASCYSAAFPEQVTALVQIEGYGPLAEAPQKAVERLRQGVLSRNRLRAKPSR NLSSFDEALMLRVAANQLSADALRPIVERGVEHRHGIWQWRHDAKLKCDSLYRLSQKHAETILDQISCFHLIILGENGFR ELKDISHLNAKNPAQIETVQGGHHCHLEQSLEVAMRILGVVNKI
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18777795, Length=128, Percent_Identity=32.03125, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI17137390, Length=292, Percent_Identity=29.1095890410959, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24655874, Length=302, Percent_Identity=24.5033112582781, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24667999, Length=272, Percent_Identity=26.4705882352941, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24667992, Length=261, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357291, Length=261, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24655886, Length=288, Percent_Identity=27.4305555555556, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI21356953, Length=297, Percent_Identity=25.5892255892256, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21356937, Length=292, Percent_Identity=23.972602739726, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31857; Mature: 31857
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETRYVIASGTLAAIEYGDVKTADLSVVFLHGWLDNAASFHRVMAELHQKNPKLHLCAI CCCCEEEEECCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEE DLPGHGLSSHKSLDNFYPFHDYIDDVYQFLRVLSPNKLLLVGHSLGALIASCYSAAFPEQ ECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHH VTALVQIEGYGPLAEAPQKAVERLRQGVLSRNRLRAKPSRNLSSFDEALMLRVAANQLSA HEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DALRPIVERGVEHRHGIWQWRHDAKLKCDSLYRLSQKHAETILDQISCFHLIILGENGFR HHHHHHHHHCHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHH ELKDISHLNAKNPAQIETVQGGHHCHLEQSLEVAMRILGVVNKI HHHHHHHCCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRETRYVIASGTLAAIEYGDVKTADLSVVFLHGWLDNAASFHRVMAELHQKNPKLHLCAI CCCCEEEEECCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEE DLPGHGLSSHKSLDNFYPFHDYIDDVYQFLRVLSPNKLLLVGHSLGALIASCYSAAFPEQ ECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHH VTALVQIEGYGPLAEAPQKAVERLRQGVLSRNRLRAKPSRNLSSFDEALMLRVAANQLSA HEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DALRPIVERGVEHRHGIWQWRHDAKLKCDSLYRLSQKHAETILDQISCFHLIILGENGFR HHHHHHHHHCHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHH ELKDISHLNAKNPAQIETVQGGHHCHLEQSLEVAMRILGVVNKI HHHHHHHCCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA