Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679178

Identifier: 37679178

GI number: 37679178

Start: 991778

End: 992185

Strand: Direct

Name: 37679178

Synonym: VV0994

Alternate gene names: NA

Gene position: 991778-992185 (Clockwise)

Preceding gene: 37679177

Following gene: 37679179

Centisome position: 29.57

GC content: 44.12

Gene sequence:

>408_bases
ATGAATAGCCATGATAAAATTCGAGTGAGAGACGTAATGGCCAATACTTTTGTCGTGGTGGATGGCCTTACCACCGTACA
TCAAGGTATTAGACTGGCGAGAGAGCATCAGGTAAAAGCTCTAGTGGTCAATAAACGTCATGAAGACGATGAGTTTGGCA
TCGTACTCATGAACGATATCGCTAAGAAAGTGTTAGCCAAAAATCGTTCACCCAATCGCACCAATATTTATGAAATCATG
ACCAAGCCTGCGTTGTGTGTTTCGCCGGATATGAACGTAAAATACTGCGCACGTTTGTTTGAGCGTTTTGGCATTAGCCG
AGCACCAGTGATTGAGAATGGTGAAGTGATCGGTATGGTCAGCTACAACAATATTGTGATCAATGCCATGGCTCGGGATG
ACGAGTAG

Upstream 100 bases:

>100_bases
CCGAATCTGGGCAAGGGATCGCCATTCAAATCGACATAGAAGATGCCGTAGGTGTGGCGCATCAAGTCGCGAAGTTGACC
AAAGTGGTTGAGGATGAAAT

Downstream 100 bases:

>100_bases
TCTTTGCAGCGTTAGAATACCCTAGTATTTTTAGGGGGAAGTGCTTGTGAAATTATTTTTTGCTTCGGATTTGCATGGCA
GCCTAGAGGCGACAGAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Signal-Transduction Protein With CBS Domains; Signal Transduction Protein With CBS Domains; CBS Domain Pair Protein; CBS Domain Containing Protein; CBS Domain Protein; CP12 Polypeptide; Signal Transduction Protein; CP12 Domain Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNSHDKIRVRDVMANTFVVVDGLTTVHQGIRLAREHQVKALVVNKRHEDDEFGIVLMNDIAKKVLAKNRSPNRTNIYEIM
TKPALCVSPDMNVKYCARLFERFGISRAPVIENGEVIGMVSYNNIVINAMARDDE

Sequences:

>Translated_135_residues
MNSHDKIRVRDVMANTFVVVDGLTTVHQGIRLAREHQVKALVVNKRHEDDEFGIVLMNDIAKKVLAKNRSPNRTNIYEIM
TKPALCVSPDMNVKYCARLFERFGISRAPVIENGEVIGMVSYNNIVINAMARDDE
>Mature_135_residues
MNSHDKIRVRDVMANTFVVVDGLTTVHQGIRLAREHQVKALVVNKRHEDDEFGIVLMNDIAKKVLAKNRSPNRTNIYEIM
TKPALCVSPDMNVKYCARLFERFGISRAPVIENGEVIGMVSYNNIVINAMARDDE

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15312; Mature: 15312

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHDKIRVRDVMANTFVVVDGLTTVHQGIRLAREHQVKALVVNKRHEDDEFGIVLMNDI
CCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEHHHH
AKKVLAKNRSPNRTNIYEIMTKPALCVSPDMNVKYCARLFERFGISRAPVIENGEVIGMV
HHHHHHCCCCCCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEE
SYNNIVINAMARDDE
EECCEEEEEEECCCC
>Mature Secondary Structure
MNSHDKIRVRDVMANTFVVVDGLTTVHQGIRLAREHQVKALVVNKRHEDDEFGIVLMNDI
CCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEHHHH
AKKVLAKNRSPNRTNIYEIMTKPALCVSPDMNVKYCARLFERFGISRAPVIENGEVIGMV
HHHHHHCCCCCCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEE
SYNNIVINAMARDDE
EECCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA