Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679137

Identifier: 37679137

GI number: 37679137

Start: 953982

End: 954617

Strand: Direct

Name: 37679137

Synonym: VV0953

Alternate gene names: NA

Gene position: 953982-954617 (Clockwise)

Preceding gene: 37679136

Following gene: 37679138

Centisome position: 28.44

GC content: 48.27

Gene sequence:

>636_bases
ATGAAAAAATGGATTGTTGTAGCGTCCGTCATGGCTTTGAGTTCATGCGCCTACTCGCCGATTTACAACGGTAAAGAACC
GTACTCGGGCAGCCAATTTATGCTGATGGAAAGCCCGCGTCATACTATGGACTTCTTTGTCGAGAGCCTGACGGAAGATC
TGATTCTGTCAAATACCAGTGTGTCTGCTCGCACGCCGATTGCCGTCACCTCGTTTGTTGATTTGCAGAACATGGATTCA
ACCAACTGGCTTGGAAATTCCGTGTCTGAAGGCTTTATTTACCAACTTCAGCGTCGTGGCTTCAAAGTCGTGGATTTCAA
AACCACGGGATCAATTCAAGTGACGCAACAAGGCGATTTTGCTTTGAGCCGTGATTGGAAAGATCTCGCACAAGAACAAG
AAATCCAATATGTACTAACAGGGACCATGCTACGACAAGAAGGCGGCGTGTTAGTCAACGCTCGCGTTGTGGGGATGCAA
ACTCGAGTGGTAGTGGCTTCAGCTCAAGGCTTCTTACCTGCTGAACGCATTGGCCGCGACTTGGATACATTGAACAGCAT
TCGCACTCAAGATGGGGTGATCATTCGTTCAGATCCGACCATTCGTCAACCATATACCGTGATCCTGCGTCCATAG

Upstream 100 bases:

>100_bases
TTGCAGAGATACAAAAGCAAAGACTGTTCCAAGATTGTAAACCAGTCGGAAAACAAAAGCAGTCTTAATGGACATCTGAG
ATTATCTGGAGATTAACCCC

Downstream 100 bases:

>100_bases
GGGGAGCTATGAAAAAGTATCTTATCGCTTTCGTTATGCTCCTTATAGTGGGATGCCAACCGCTGCAACAGATGCGTCAA
GACGATATGCTGGTTGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKKWIVVASVMALSSCAYSPIYNGKEPYSGSQFMLMESPRHTMDFFVESLTEDLILSNTSVSARTPIAVTSFVDLQNMDS
TNWLGNSVSEGFIYQLQRRGFKVVDFKTTGSIQVTQQGDFALSRDWKDLAQEQEIQYVLTGTMLRQEGGVLVNARVVGMQ
TRVVVASAQGFLPAERIGRDLDTLNSIRTQDGVIIRSDPTIRQPYTVILRP

Sequences:

>Translated_211_residues
MKKWIVVASVMALSSCAYSPIYNGKEPYSGSQFMLMESPRHTMDFFVESLTEDLILSNTSVSARTPIAVTSFVDLQNMDS
TNWLGNSVSEGFIYQLQRRGFKVVDFKTTGSIQVTQQGDFALSRDWKDLAQEQEIQYVLTGTMLRQEGGVLVNARVVGMQ
TRVVVASAQGFLPAERIGRDLDTLNSIRTQDGVIIRSDPTIRQPYTVILRP
>Mature_211_residues
MKKWIVVASVMALSSCAYSPIYNGKEPYSGSQFMLMESPRHTMDFFVESLTEDLILSNTSVSARTPIAVTSFVDLQNMDS
TNWLGNSVSEGFIYQLQRRGFKVVDFKTTGSIQVTQQGDFALSRDWKDLAQEQEIQYVLTGTMLRQEGGVLVNARVVGMQ
TRVVVASAQGFLPAERIGRDLDTLNSIRTQDGVIIRSDPTIRQPYTVILRP

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23583; Mature: 23583

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWIVVASVMALSSCAYSPIYNGKEPYSGSQFMLMESPRHTMDFFVESLTEDLILSNTS
CCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
VSARTPIAVTSFVDLQNMDSTNWLGNSVSEGFIYQLQRRGFKVVDFKTTGSIQVTQQGDF
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEECCCE
ALSRDWKDLAQEQEIQYVLTGTMLRQEGGVLVNARVVGMQTRVVVASAQGFLPAERIGRD
EECCCHHHHHHHHHEEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCHHHHCCC
LDTLNSIRTQDGVIIRSDPTIRQPYTVILRP
HHHHHHHHCCCCEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MKKWIVVASVMALSSCAYSPIYNGKEPYSGSQFMLMESPRHTMDFFVESLTEDLILSNTS
CCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
VSARTPIAVTSFVDLQNMDSTNWLGNSVSEGFIYQLQRRGFKVVDFKTTGSIQVTQQGDF
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEECCCE
ALSRDWKDLAQEQEIQYVLTGTMLRQEGGVLVNARVVGMQTRVVVASAQGFLPAERIGRD
EECCCHHHHHHHHHEEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCHHHHCCC
LDTLNSIRTQDGVIIRSDPTIRQPYTVILRP
HHHHHHHHCCCCEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA