Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679131

Identifier: 37679131

GI number: 37679131

Start: 948403

End: 949521

Strand: Direct

Name: 37679131

Synonym: VV0946

Alternate gene names: NA

Gene position: 948403-949521 (Clockwise)

Preceding gene: 37679126

Following gene: 37679132

Centisome position: 28.27

GC content: 48.17

Gene sequence:

>1119_bases
ATGTCTTACCTAAAGAAAAGCTTATTAGCAACAGCAGTGACTGGCCTAATGTTCAGTGGTGCAGCATTTGCAGAAGGTGC
GAACAGCGATGCAGCAAAAAACTATTTAACTAAAGACTCTTTTGCATACGAAGTATACGGTGTAATTGCGATGCAGGCCG
CTTACCGCGATTACGATTCTGGTGACGCAAAAACAGATGACAACCTAGGTGGCATGCAGTTCAACAACGAATCGCGCATT
GGTTTCCGCGGTAAGAAGAACTTTGCTAACTTCGGGCCAACGTTCATTTGGCAAATTGAAGGTGGCTATGTAGACCCAAG
CTTCGGCGGTGAAGGTGCTGGCCTTGGTGAACGTGATACATTCGTTGGTTTTGAAAGTGAATCAATGGGCCAAGTCCGTG
TTGGTCGCGTATTGACTCCGCTTTACGAAGTGGTTGACTGGCCAGGATCGAACCCAGGTCTAGGTGATGTATACGACTGG
GGTGGCGCTATCGGTGGTGCTAAGTACCAAGATCGCCAATCTAACACCATCCGTTGGGACTCTCCAATGTACGGCGAAGC
ATTCTCTCTAGATGTGGCAGCTGGCGCTGGTGACAAGGCTGGCCTTGGTGAAGGCGACGATTTCTGGGCTGGCTTAGCGG
CACACTACAAAATTGGTCCAATCCAATTAGACGCGGCGTACGAAGGTAACCGCAATATTGTTGCTGAAGGTCAAACTTGG
GACAACGATACTTACCTAGTGGGCGTTCAAGGTTGGTTTGAAAACGGCATTTCTTTCTTCGCTCAATACAAGATGATGGA
AGCAAGTGCTAACAACGGTGTTGACGAGAAGCAAAATGCAATGACTGCAGGCTTGATGTACACCACGGGTGACTGGCAGT
ACAAATTGGGCTACGCGGCTAACTTTGAGCTAGAGCGTAACGGCAAAACAATCAACAACACAGATGACAACGTAATTTCT
GCACAAGTTATGTACTTTGTTGACCCATCTGCAGTACTGTACGCTCGTGCTCGTACGCTAGACTTTGGTGACGGCGCAGA
AGCACTTGATGGTTCAGGCGCTCGCTGGAAGTCAGCAGATTACACTGAATTCTCAGTGGGTGTTGAATACTACTTCTAA

Upstream 100 bases:

>100_bases
CTGAGATATTTGCCCCGTCCAAACATGACTGGTGAGCTTGGTTCTATGTCCTAGGGAAGTAAGCAAGCCAAGGAAAACTA
AAAAGATATAGGGGTTAAAC

Downstream 100 bases:

>100_bases
CTCGTTAGAAATCAAGAAAGGGCGGCAACGCCCTTTCTTCGTTGATAAGTGGAACTGAAATATGAAAAAAATGATGATTC
TGAGTGCGCTAGCACTATTT

Product: outer membrane protein

Products: NA

Alternate protein names: Chitoporin; Outer Membrane Porin Protein; Chitoporin ChiP

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSYLKKSLLATAVTGLMFSGAAFAEGANSDAAKNYLTKDSFAYEVYGVIAMQAAYRDYDSGDAKTDDNLGGMQFNNESRI
GFRGKKNFANFGPTFIWQIEGGYVDPSFGGEGAGLGERDTFVGFESESMGQVRVGRVLTPLYEVVDWPGSNPGLGDVYDW
GGAIGGAKYQDRQSNTIRWDSPMYGEAFSLDVAAGAGDKAGLGEGDDFWAGLAAHYKIGPIQLDAAYEGNRNIVAEGQTW
DNDTYLVGVQGWFENGISFFAQYKMMEASANNGVDEKQNAMTAGLMYTTGDWQYKLGYAANFELERNGKTINNTDDNVIS
AQVMYFVDPSAVLYARARTLDFGDGAEALDGSGARWKSADYTEFSVGVEYYF

Sequences:

>Translated_372_residues
MSYLKKSLLATAVTGLMFSGAAFAEGANSDAAKNYLTKDSFAYEVYGVIAMQAAYRDYDSGDAKTDDNLGGMQFNNESRI
GFRGKKNFANFGPTFIWQIEGGYVDPSFGGEGAGLGERDTFVGFESESMGQVRVGRVLTPLYEVVDWPGSNPGLGDVYDW
GGAIGGAKYQDRQSNTIRWDSPMYGEAFSLDVAAGAGDKAGLGEGDDFWAGLAAHYKIGPIQLDAAYEGNRNIVAEGQTW
DNDTYLVGVQGWFENGISFFAQYKMMEASANNGVDEKQNAMTAGLMYTTGDWQYKLGYAANFELERNGKTINNTDDNVIS
AQVMYFVDPSAVLYARARTLDFGDGAEALDGSGARWKSADYTEFSVGVEYYF
>Mature_371_residues
SYLKKSLLATAVTGLMFSGAAFAEGANSDAAKNYLTKDSFAYEVYGVIAMQAAYRDYDSGDAKTDDNLGGMQFNNESRIG
FRGKKNFANFGPTFIWQIEGGYVDPSFGGEGAGLGERDTFVGFESESMGQVRVGRVLTPLYEVVDWPGSNPGLGDVYDWG
GAIGGAKYQDRQSNTIRWDSPMYGEAFSLDVAAGAGDKAGLGEGDDFWAGLAAHYKIGPIQLDAAYEGNRNIVAEGQTWD
NDTYLVGVQGWFENGISFFAQYKMMEASANNGVDEKQNAMTAGLMYTTGDWQYKLGYAANFELERNGKTINNTDDNVISA
QVMYFVDPSAVLYARARTLDFGDGAEALDGSGARWKSADYTEFSVGVEYYF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40446; Mature: 40315

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLKKSLLATAVTGLMFSGAAFAEGANSDAAKNYLTKDSFAYEVYGVIAMQAAYRDYDS
CCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
GDAKTDDNLGGMQFNNESRIGFRGKKNFANFGPTFIWQIEGGYVDPSFGGEGAGLGERDT
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCE
FVGFESESMGQVRVGRVLTPLYEVVDWPGSNPGLGDVYDWGGAIGGAKYQDRQSNTIRWD
EEEECCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEC
SPMYGEAFSLDVAAGAGDKAGLGEGDDFWAGLAAHYKIGPIQLDAAYEGNRNIVAEGQTW
CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHEEEECCEEEEEEECCCCEEEECCCCC
DNDTYLVGVQGWFENGISFFAQYKMMEASANNGVDEKQNAMTAGLMYTTGDWQYKLGYAA
CCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCCEEEEEEEEE
NFELERNGKTINNTDDNVISAQVMYFVDPSAVLYARARTLDFGDGAEALDGSGARWKSAD
EEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCCHHCCCCCCCCCCCC
YTEFSVGVEYYF
CEEEEEEEEEEC
>Mature Secondary Structure 
SYLKKSLLATAVTGLMFSGAAFAEGANSDAAKNYLTKDSFAYEVYGVIAMQAAYRDYDS
CHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
GDAKTDDNLGGMQFNNESRIGFRGKKNFANFGPTFIWQIEGGYVDPSFGGEGAGLGERDT
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCE
FVGFESESMGQVRVGRVLTPLYEVVDWPGSNPGLGDVYDWGGAIGGAKYQDRQSNTIRWD
EEEECCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEC
SPMYGEAFSLDVAAGAGDKAGLGEGDDFWAGLAAHYKIGPIQLDAAYEGNRNIVAEGQTW
CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHEEEECCEEEEEEECCCCEEEECCCCC
DNDTYLVGVQGWFENGISFFAQYKMMEASANNGVDEKQNAMTAGLMYTTGDWQYKLGYAA
CCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCCEEEEEEEEE
NFELERNGKTINNTDDNVISAQVMYFVDPSAVLYARARTLDFGDGAEALDGSGARWKSAD
EEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCCHHCCCCCCCCCCCC
YTEFSVGVEYYF
CEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA